Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1206 ATGTCCGCCGCCGACGCCACCGTTAACGGCGCCTCTCCGCCGCCGGAGACCCAACCACCTCTTCCCACATCAGACAATGCCTTCGCCGCCGAATTATCCTCCGCCGCCGCCACAAAAGCCCCTTCCGATGCAAACGCCGCCACCCACGACAACCCATCTACTGAAAATCTTGAATCTGAGATTCCCAAGGTAGACGAAGCTTCCACTGATCAGACCCCAACAACAACAACTACTAACACTGTTAATACTACTACTACCACCCCACCTGAGAAAAGATGGCCAGGTTGGCCTGGGGATTGTGTGTTTCGTCTCATTGTGCCTGTTGTTAAAGTTGGTAGTATCATTGGCCGCAAGGGTGAGCTTATTAAGAAGATGTGTGAGGACACTCGTGCTCGCATTCGTGTTCTTGATGGTGCCGTGGGTACTCCCGATCGAATTGTACTTATATCCGGGAAGGAAGAGCTAGAGTCACCTCTTTCCCCTGCAATGGATGCTGCAATAAGGGTATTTAAGCGTGTCTATGGATTGTCTGAAGGTGAAGGTGAGAATAAAGCGTCAGGACCTGCTGATGTTGCATATGTTTCTGTACGTCTGTTGGTGGCATCAACACAGGCGATCAATTTGATTGGAAAACAAGGTTCATTAATTAAATCTATACAGGAGAGTACTGGTGCTTCTGCTCGTGTATTGTCTGGAGATGAGGTGCCATTATATGCTGCTGCGGATGAGAGGATTGTAGAGTTGCAGGGAGAAGCCTTGAAGGTCCTTAAGGCTCTGGAAGCAGTAGTTGGCCACCTACGAAAGTTCTTGGTTGATCATAGCGTTCTTCCCCTTTTTGAGAAAAAAACTTACAATGCAACAACTTCACAAGATCGCCAAGCAGATGCCTGGGCTGACAAGACATCTCTGCATAGTGCTTCTCAAACCAGCATTAGTGCTGATATACCTCTCCCAACAAAAAGGGAATCTCTCTTTGTTGAGCGTGAAACTCATTTGGATTCAAAACTCCCACCCTCGGCAGTGTCACTCTATGGGCAAGATTCTTCACTTCCCAGTGTTCGTTCCTCAACACTTGGTCGTGGTGGTGCTCCCATTGTCACCAATGTGATACAAACAATGCAAATACCACTATCCTATGCTGAGGACATCATCGGCATACAAGGGACTAATATTGCTTACATTCGCCGTACTAGTGGAGCCATACTGACTGTGCAAGAGAGCAGAGTGCCTGATGAAATTATCGTGGAAATTAAAGGCACCTCAACACAAGTCCAATTGGCACAACAGTTGATCCAGGACGTGATAAGCAATCACAAAGAACCAGCCACTAGCAGTTACGGTAGGTTAGATGCTGGTGGTGGACTGAGGTCTTCATATGCTCAGCTGGGGGGTGGCTCATCTTACTCATCTTCCTCAGTCACCTCACAGCCCTATACAGGTTATGGCTCTTCTGGTTTAGGAGGCTACAGTTCTTTTAGACTCTGA 1485 0.4795 MSAADATVNGASPPPETQPPLPTSDNAFAAELSSAAATKAPSDANAATHDNPSTENLESEIPKVDEASTDQTPTTTTTNTVNTTTTTPPEKRWPGWPGDCVFRLIVPVVKVGSIIGRKGELIKKMCEDTRARIRVLDGAVGTPDRIVLISGKEELESPLSPAMDAAIRVFKRVYGLSEGEGENKASGPADVAYVSVRLLVASTQAINLIGKQGSLIKSIQESTGASARVLSGDEVPLYAAADERIVELQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKKTYNATTSQDRQADAWADKTSLHSASQTSISADIPLPTKRESLFVERETHLDSKLPPSAVSLYGQDSSLPSVRSSTLGRGGAPIVTNVIQTMQIPLSYAEDIIGIQGTNIAYIRRTSGAILTVQESRVPDEIIVEIKGTSTQVQLAQQLIQDVISNHKEPATSSYGRLDAGGGLRSSYAQLGGGSSYSSSSVTSQPYTGYGSSGLGGYSSFRL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1206 494 MobiDBLite consensus disorder prediction 38 58 - -
Mibi13g1206 494 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 88 461 - -
Mibi13g1206 494 MobiDBLite consensus disorder prediction 1 94 - -
Mibi13g1206 494 ProSiteProfiles Type-1 KH domain profile. 99 166 - -
Mibi13g1206 494 ProSiteProfiles Type-1 KH domain profile. 368 431 - -
Mibi13g1206 494 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 190 274 IPR036612 GO:0003723
Mibi13g1206 494 Gene3D - 99 270 - -
Mibi13g1206 494 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 92 154 IPR036612 GO:0003723
Mibi13g1206 494 CDD KH-I 370 432 - -
Mibi13g1206 494 CDD PCBP_like_KH 101 170 - -
Mibi13g1206 494 MobiDBLite consensus disorder prediction 66 90 - -
Mibi13g1206 494 Pfam KH domain 371 433 IPR004088 GO:0003723
Mibi13g1206 494 Pfam KH domain 196 262 IPR004088 GO:0003723
Mibi13g1206 494 Pfam KH domain 102 154 IPR004088 GO:0003723
Mibi13g1206 494 Gene3D K Homology domain, type 1 367 442 IPR036612 GO:0003723
Mibi13g1206 494 SMART kh_6 98 171 IPR004087 GO:0003676
Mibi13g1206 494 SMART kh_6 192 267 IPR004087 GO:0003676
Mibi13g1206 494 SMART kh_6 367 436 IPR004087 GO:0003676
Mibi13g1206 494 CDD PCBP_like_KH 195 263 - -
Mibi13g1206 494 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 365 438 IPR036612 GO:0003723
Mibi13g1206 494 ProSiteProfiles Type-1 KH domain profile. 193 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1206 Mibi-ChrMibi13 16146503 16151248 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g1206 13 16146503 16151248 Mibi13g1206 13 16146503 16151248 ECH