Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0943 ATGGGTAACAAAAAGAAACAGGTTGGAGAAAAATCAAGTGATAATAGTGGAGATAACAGCTTCAAAGCTTATGATAAGGATACTGAGGTGTTTATTTCCATGGCTCAAGAGTTGAAGAGTGAAGGAAACAAGCTGTTCCAAAAGAGAGATCATGAAGGAGCCATCTTAAAATATGAGAAAGCCATTAAATTGCTACCAAGAAATCATATAGATGTGTCTTGTCTTAGGAGTAACATGGCAGCATGCTACATGCAGATGGGATTCGGCAATTATCCGAGGGCTATTCATGAATGCACTTTAGCTCTTGAAGTTACTCCAAAGTACAGCAAAGCCCTTTTGAAGAGAGCAAAGTGCTATGAGGCTTTAAATAGGCTGGATTTAGCTCTGAGAGACGTTAATACTGTCCTGAAAATGGAGCCAAACAATATTATGGCATTGGAAATTTCAGAGAAGGTGAAAAATGCAATTGAGGAGAAGGGATTAAAAGTAGATGACATAGCAATTGAGTTGCCTTCTGATCATGCTGAACCAAAAGTGGTAAAAGAGAAGAAACACAAGAAAAGCAAAAGGACTGCTGAGAAGTTGGAAGACAAGTCAGAGGACAGTGTTGAGCAGAAGAATGCTGTGAAAAAATCTGAAGAGAAGTTGGAAGACAAGAAGTCAGAGGACAGTGCTGAGCAGAAGAATGCCGTGAAAAGATCTGAAGAGAAGTTGGAAGACAAGAAGTCAGAGGACAGTGCTGAGCAGAAGAATGCTGTGAAAAGATCTGAAGAGAAGTTGGAAGACAAGAAAGTGGTGGAGGACGGTATTGAGAAGAAAAAGGTTGCGAACAAATCCAAAAAGAAGGCGGCGAAGGAAAACATTAGTGAGAAGAAGGCTGATATAAAGGAGGTTATCGAGGAAAAATTTAATAATGGCAGAAAGGAAGGTGCAGCTAAGAAAACAGTGAAACTTGTTTTTAGAGAGGATATTAGACTTGCCGAGTTGCAAGTCAATTGCAGCCTCCAGCATCTAAGGGAAGTTATCAGCGACCGATTTCCAAGTGTAGGGGCAGTTCTTGTCAAATACAGGGATCATGAAGGTGATTTAGTCACAATTACTTCTGAAGAAGAATTAAGATTGGCTGAAAAATCAGCAGCATCAGAGAGTTGTATCCGCCTGTACATAGTGGACACAGATCCTGCGCAGGATCCATTGTTTGAGAAAATTAATGAAAAGAAGGAGCAAAAGCATGTCATTGATAATGGATTTGAGAATGGTTGTGTGGTAAAAGAAAAGGAAATGATTACGTCATCTTGCATTGAAGATTGGATAATCCAGTTTGCCCAAATGTTCAAGAACCATGTTGGAATCGGATCTGATAGATATCTAGATTTTCATGAACTTGGAATGAAACTCTATTCTGAGGCTATGGAGGCAACAGTTACTAGTGAAGAAGCACTAAGCTTGTTTGACATGGCAGGAGCTAAGTTCCAAGAAATGGCAGCTTTAGCATTGTTCAACTGGGGAAATGTTCACATGTCAAGGGCAAAGAAGAAAGTGAATTTCACAGAAGAATCTTCTAAAGAAGAGAATCTGCATGAACAGATAAGAAATTCATATGAATGGGTACAGGAAGAATATAAAAGAGCAGGAGAAAAATATGAAGCAGCCATTAAAATCAAACCTGATTTTTATGAAGGCTTCCTGGCACTAGGGCAACAACAATTTGAGCAAGCAAAATTGTCTTGGTATTATGCAGTCAACACAAATGTTGACTTAGCAACATGGCCTTCCACTGAGGTTCTTCAACTTTACAACCAAGCCGAGGAAAACATGGAGAAAGGAATGCATATATGGGAAGAATCGGAAAAGCGATGCTTGAACGAAGATTCTAAATCAAAGGATATCAAATTCCATCTACAGAACATGGGATTGGATTGCCTATTGCAAAATATATCAGCAGAAGAAATAGCAGCACAGGCAGAAACTTTGAGGTCTCAAATAAATATTCTTTGGGGTACCATGCTATATGAGCGTTCAATTATGGAATTCAAATTAGGGCTACCAGTATGGCATGAATGTCTAGAAGTTGCAGTTGAGAAGTTTGAACTAGCTGGAGCTTCGTCAACAGATATAGCTGTAATGTTGAAGAACCACTGTTCAAATAATACTGCTGCTGAAGGTCTAGGATTTAACATCGATGAGATAGTACAAGCGTGGAATGAGATGTATGAAGCTAGAAGGTGGCAAAGTCGAGTTTCATCGTTTCATTTGGAACCCTTATTCAGAAGGAGAGCTTCAAAAATCTATCATGCGTTGGAGCTTGCATGA 2313 0.3934 MGNKKKQVGEKSSDNSGDNSFKAYDKDTEVFISMAQELKSEGNKLFQKRDHEGAILKYEKAIKLLPRNHIDVSCLRSNMAACYMQMGFGNYPRAIHECTLALEVTPKYSKALLKRAKCYEALNRLDLALRDVNTVLKMEPNNIMALEISEKVKNAIEEKGLKVDDIAIELPSDHAEPKVVKEKKHKKSKRTAEKLEDKSEDSVEQKNAVKKSEEKLEDKKSEDSAEQKNAVKRSEEKLEDKKSEDSAEQKNAVKRSEEKLEDKKVVEDGIEKKKVANKSKKKAAKENISEKKADIKEVIEEKFNNGRKEGAAKKTVKLVFREDIRLAELQVNCSLQHLREVISDRFPSVGAVLVKYRDHEGDLVTITSEEELRLAEKSAASESCIRLYIVDTDPAQDPLFEKINEKKEQKHVIDNGFENGCVVKEKEMITSSCIEDWIIQFAQMFKNHVGIGSDRYLDFHELGMKLYSEAMEATVTSEEALSLFDMAGAKFQEMAALALFNWGNVHMSRAKKKVNFTEESSKEENLHEQIRNSYEWVQEEYKRAGEKYEAAIKIKPDFYEGFLALGQQQFEQAKLSWYYAVNTNVDLATWPSTEVLQLYNQAEENMEKGMHIWEESEKRCLNEDSKSKDIKFHLQNMGLDCLLQNISAEEIAAQAETLRSQINILWGTMLYERSIMEFKLGLPVWHECLEVAVEKFELAGASSTDIAVMLKNHCSNNTAAEGLGFNIDEIVQAWNEMYEARRWQSRVSSFHLEPLFRRRASKIYHALELA 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0943 770 ProSiteProfiles PB1 domain profile. 313 392 IPR000270 GO:0005515
Mibi13g0943 770 Coils Coil 178 222 - -
Mibi13g0943 770 MobiDBLite consensus disorder prediction 177 260 - -
Mibi13g0943 770 SMART PB1_new 313 392 IPR000270 GO:0005515
Mibi13g0943 770 SUPERFAMILY CAD & PB1 domains 314 400 - -
Mibi13g0943 770 ProSiteProfiles TPR repeat profile. 109 142 IPR019734 GO:0005515
Mibi13g0943 770 MobiDBLite consensus disorder prediction 189 260 - -
Mibi13g0943 770 MobiDBLite consensus disorder prediction 1 22 - -
Mibi13g0943 770 SMART tpr_5 73 108 IPR019734 GO:0005515
Mibi13g0943 770 SMART tpr_5 109 142 IPR019734 GO:0005515
Mibi13g0943 770 SMART tpr_5 35 68 IPR019734 GO:0005515
Mibi13g0943 770 ProSiteProfiles TPR repeat profile. 35 68 IPR019734 GO:0005515
Mibi13g0943 770 Coils Coil 281 301 - -
Mibi13g0943 770 SUPERFAMILY TPR-like 23 147 IPR011990 GO:0005515
Mibi13g0943 770 Gene3D - 299 391 - -
Mibi13g0943 770 CDD PB1 315 389 - -
Mibi13g0943 770 Pfam PB1 domain 315 391 IPR000270 GO:0005515
Mibi13g0943 770 Gene3D Tetratricopeptide repeat domain 32 164 IPR011990 GO:0005515
Mibi13g0943 770 PANTHER PROTEIN CLMP1 5 768 IPR044517 -
Mibi13g0943 770 Coils Coil 224 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0943 Mibi-ChrMibi13 12085091 12087493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0943 18 142 Calmodulin-binding Proteins AT3G25230 33.577 3.75e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0943 13 12085091 12087493 Mibi13g0943 13 12085091 12087493 ECH