Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0827 ATGGCATTAGAATTTAGGCACAATCACCACCACCATCACGTAACAATGGTGTTCTTCTTCTTCTTCGTCTTGTGTGCCATGGCTTCCAAAGGTTATGGCGTTGGAGTGAACTGGGGAACAATGGCCACGCATCAACTTCCGCCTGAGAAGGTGGTTAAGATGCTGAAACAGAATGGATTTAATAAATTGAAGTTGTTTGATGCAGACGAGTGGATCATGGCGGCTTTAATGGGGACTGATATCGAAGTTATGCTCGCAATCCCTAATAGCATGTTGGAGGAAATGAGTAAGAACCCTAGTGCTGCTGATTCTTGGGTCGCTGAAAATGTCACCGGTTACTCGTATCCTGGTGGAGTCAATATCAAGTATGTTGCCGTGGGTAATGAGCCATTCCTTAAAGCTTATAATGGCACTTATCTGCAAACAACTTTCCCAGCACTGAAGAACATTCAAACGTCACTCTATAATGCTGGCTTGGGTTCAAAGGTTAAAGTCACAGTTCCCTTCAATGCAGACATTTATTTTTCCCCTGATTCAAATCCAGTGCCATCAGCTGGTGACTTCAGGCCTGAAATAAGAGACCTTACTCTTGAAATCGTCCAGTTTTTATATTCATGTGATGCCCCTTTTACTGTGAATATATATCCATTCCTTAGTCTTTGTGGCAATGACAACTTCCCCATTGAATTTGCATTTTTTGGGGGAAACAGTGAGCCTCTTAGAGATGGAAGTTTACTTTACACTAACGTATTTGATGCCAATTTGGACACTCTTGTATGGGCTTTAATAAAGGCTGGGTACCCTGACATACAAGTCCTCGTCGGGGAAGTCGGGTGGCCAACCGATGGTGATAAGAATGCTAATATTCAAAATGCAAAAAGGTTCAACCAAGGTTTGCTTAAACATATTATGAGTGGAAATGGCACCCCAAAAAGGACAGGAAAAATTGACATGTATCTGTTCAGCCTCATCGATGAGAATGCAAAAAGTGTTGCTCCCGGCATGTTTGAAAGGCACTGGGGGATTTTTGAGTTTGATGGGAAGCCAAAGTATGAATTGGACTTAACAGGTCAAGAGCAAAATAAAGGTCTGGTTCCTGTACAAGGTATAAAATATATGGAAAGACAATGGTGTGTTATGAACACTGATGCTGATAGCAATGCAATGTTCTTGGCTCATAGTATTGACTATGCTTGTAGTCTATCTGATTGTACTGCTCTGGGTTATGGATCTTCTTGTAATAATCTGAGCCTGGAAGGGAATGCATCTTACGCCTTCAACATGTATTATCAGGTAAACAACCAAAGGGATAATGATTGTGATTTCTCTGGTTTGGCTATTTTAACAGATGAGGATCCATCAGAAAATGGATGCCACTTCCCAGTGATGATATCTTATGGTTCTTCATTGGTGCATGGAGGGCTATCGTATATACTATGGAATGTTGTGTATGTATGTACTTTGATTATGATTTTGCTATAG 1482 0.4109 MALEFRHNHHHHHVTMVFFFFFVLCAMASKGYGVGVNWGTMATHQLPPEKVVKMLKQNGFNKLKLFDADEWIMAALMGTDIEVMLAIPNSMLEEMSKNPSAADSWVAENVTGYSYPGGVNIKYVAVGNEPFLKAYNGTYLQTTFPALKNIQTSLYNAGLGSKVKVTVPFNADIYFSPDSNPVPSAGDFRPEIRDLTLEIVQFLYSCDAPFTVNIYPFLSLCGNDNFPIEFAFFGGNSEPLRDGSLLYTNVFDANLDTLVWALIKAGYPDIQVLVGEVGWPTDGDKNANIQNAKRFNQGLLKHIMSGNGTPKRTGKIDMYLFSLIDENAKSVAPGMFERHWGIFEFDGKPKYELDLTGQEQNKGLVPVQGIKYMERQWCVMNTDADSNAMFLAHSIDYACSLSDCTALGYGSSCNNLSLEGNASYAFNMYYQVNNQRDNDCDFSGLAILTDEDPSENGCHFPVMISYGSSLVHGGLSYILWNVVYVCTLIMILL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0827 493 SMART X8_cls 376 460 IPR012946 -
Mibi13g0827 493 Pfam X8 domain 376 446 IPR012946 -
Mibi13g0827 493 SUPERFAMILY (Trans)glycosidases 34 354 IPR017853 -
Mibi13g0827 493 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 448 IPR044965 GO:0004553|GO:0005975
Mibi13g0827 493 FunFam Glucan endo-1,3-beta-glucosidase 5 33 361 - -
Mibi13g0827 493 Gene3D - 371 463 - -
Mibi13g0827 493 FunFam Glucan endo-1,3-beta-glucosidase 8 372 469 - -
Mibi13g0827 493 Gene3D Glycosidases 33 363 - -
Mibi13g0827 493 Pfam Glycosyl hydrolases family 17 34 354 IPR000490 GO:0004553|GO:0005975
Mibi13g0827 493 ProSitePatterns Glycosyl hydrolases family 17 signature. 270 283 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0827 Mibi-ChrMibi13 10564601 10566442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0827 33 464 Miscellaneous Gene Families AT2G19440 59.491 0.0 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0827 13 10564601 10566442 Mibi13g0827 13 10564601 10566442 ECH