Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0658 ATGAAGAGAGGCAAATTAGTGAAATTAGATACCTTTTTATCATTAACTAGGCAGAGATCCATTCAGATTTTGATCGGAATTGGGCTTTTGTACATACTCTTAGTCACAGTGGAAATCCCCTTCGTATTCAAAACTGGGTTCAGCTCTGTCTCTCAGGAGTTCTTAACTCGTCCCTCTAAGCTCGAAAGCGAGGAAGATTTGGAAGAGAGAGAAGCTCCTTCTCGTCCCCTAGAAAAAGTTTCTCTAAACGCGTACCAACCGATTCCGAGTCAACTCACTCATCACAAGATTCTCTCTGGCTTGATCTTTGATAGCACTACATTCGATTCAGGCGCTAAGGATGGTTCTCTTGAGCTTTACAAATCAGCTAAGAATGCGTGGAAAGTGGGGAAGAAAATCTGGGATGAGTTAGAATCTGGGAAATCTCGAACCTTTAACAAGAAATCGAAGAATTCATCGGATTCATGTGTGAGATCGATTTCGTTGTCAAGTTCGGATTTTTTGGCACAGGGGGGAATCATGGTACTTCCTTGTGGGCTGACATTGGGGTCCCACATAACGGTTGTGGCGAAGCCGTTGGCGGCGCACGCGGAGTTTGAGCCGAAGATATCGTTGGCGAAGGATGGTGATGAACCGGTGATGGTGTCACAGTTCATGATGGAGTTGCAGGGTTTGAAGACTGTGGATGGTGAGGAACCACCAAGGGTTTTGCATTTTAATCCCAGATTGAAAGGGGATTGGAGTGGGAAGCCTGTGATTGAGCTCAACACTTGTTACAGAATGCAGTGGGGTTCGGCTCTAAGATGTGATGGTTGGAAATCCAAAGCTGATGAAGAGACTGTTGATGGACTGGTGAAGTGTGAGAAGTGGATCCGGGATGATGACGATCATGCAGAGGAGTCCAAGGCTAGATGGTGGTTGAATAGACTGATAGGCCGGACCAAGAAAGTTTCAGTTGACTGGCCATTCCCATTTTCTGAGAGCAAGCTATTTGTTCTCACTCTTAGTGCTGGATTGGAGGGTTATCATATTAATGTTGATGGGAGGCATGTGGCATCCTTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCCACTGGGCTTTCTTTGAGTGGGGATATTGATGTCCACTCTGTATTTGCTGCGTCTTTGCCTTCAACCCATCCAAGTTTTGCCCCACAGAAGCATCTTGATTGGTCGGATAGATGGCGTGCCCCTCCTCTTCCTAATTCTGATGTCGAAATGTTTATTGGCATCCTTTCTGCTGGAAATCACTTTGCTGAGCGGATGGCTGTAAGAAAGTCATGGATGCAACATAGGCTCATCAAAACATCAAAAGTGGTGGCTCGTTTCTTTGTTGCACCGCATCCCAGAAAAGAAGTAAATGCAGAGTTGAAGAAGGAAGCAGAATATTTTGGTGACATTGTTGTGGTGCCCTACATGGATAACTATGACCTTGTTGTGCTGAAGACAGTGGCCATTTGTGAATATGGGGTTCGCACGGTTTCTGCCAAGTATGTCATGAAGGGTGATGACGACACTTTTGTAAGAGTGGACTCTGTATTGGATGTAGCAAGGAACTTTCCAGATGACAAGAGCTTCTATATTGGGAACATAAACTACTACCACAAGCCCTTACGCGATGGTAAATGGGCCGTGACATACGAGGAATGGCCTGAAGAGGATTACCCACCCTATGCTAATGGACCTGGCTATATCTTATCGTCTGATATCGCACGCTTTGTGGTATCTGAATTTGAAAGGCATAAATTAAGGTTGTTTAAAATGGAAGATGTAAGTATGGGAATGTGGGTAGAGCAATTCAATAAGACGAAACCGGTGGAGTATTTGCATAGCTTGAGGTTCTGCCAATTTGGTTGCATAGAAGAGTATTACACAGCTCATTACCAATCGCCAAGGCAGATGATGTGTATGTGGGATAGATTGCAGAGACAAACAACCCCTCAGTGCTGCAACATGAGATGA 1986 0.4491 MKRGKLVKLDTFLSLTRQRSIQILIGIGLLYILLVTVEIPFVFKTGFSSVSQEFLTRPSKLESEEDLEEREAPSRPLEKVSLNAYQPIPSQLTHHKILSGLIFDSTTFDSGAKDGSLELYKSAKNAWKVGKKIWDELESGKSRTFNKKSKNSSDSCVRSISLSSSDFLAQGGIMVLPCGLTLGSHITVVAKPLAAHAEFEPKISLAKDGDEPVMVSQFMMELQGLKTVDGEEPPRVLHFNPRLKGDWSGKPVIELNTCYRMQWGSALRCDGWKSKADEETVDGLVKCEKWIRDDDDHAEESKARWWLNRLIGRTKKVSVDWPFPFSESKLFVLTLSAGLEGYHINVDGRHVASFPYRTGFTLEDATGLSLSGDIDVHSVFAASLPSTHPSFAPQKHLDWSDRWRAPPLPNSDVEMFIGILSAGNHFAERMAVRKSWMQHRLIKTSKVVARFFVAPHPRKEVNAELKKEAEYFGDIVVVPYMDNYDLVVLKTVAICEYGVRTVSAKYVMKGDDDTFVRVDSVLDVARNFPDDKSFYIGNINYYHKPLRDGKWAVTYEEWPEEDYPPYANGPGYILSSDIARFVVSEFERHKLRLFKMEDVSMGMWVEQFNKTKPVEYLHSLRFCQFGCIEEYYTAHYQSPRQMMCMWDRLQRQTTPQCCNMR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0658 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 175 380 IPR013320 -
Mibi13g0658 661 Gene3D - 172 380 - -
Mibi13g0658 661 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 375 610 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mibi13g0658 661 FunFam Hydroxyproline O-galactosyltransferase GALT2 296 380 - -
Mibi13g0658 661 CDD GLECT 176 380 IPR001079 GO:0030246
Mibi13g0658 661 Gene3D - 407 658 - -
Mibi13g0658 661 FunFam Hydroxyproline O-galactosyltransferase GALT4 171 289 - -
Mibi13g0658 661 Pfam Galactosyltransferase 428 608 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mibi13g0658 661 FunFam Hydroxyproline O-galactosyltransferase 406 649 - -
Mibi13g0658 661 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 382 IPR001079 GO:0030246
Mibi13g0658 661 Pfam Galactoside-binding lectin 173 380 IPR001079 GO:0030246
Mibi13g0658 661 SMART Gal_bind_lectin_2 176 381 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0658 Mibi-ChrMibi13 8556600 8559560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0658 5 661 Glycosyltransferase AT1G74800 66.766 0.0 936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0194 09 2515075 2519065 Mibi13g0658 13 8556600 8559560 CCT
Mibi13g0658 13 8556600 8559560 Mibi13g0658 13 8556600 8559560 ECH