Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0631 ATGTCTGCGACTAATTCAAAGTTCATCAAATGCGTCACAGTTGGAGACGGAGCTGTTGGGAAGACCTGCATGCTTATGTGCTATACCAGCAATAAATTCCCTACTGACTATATTCCGACGGTGTTCGATAATTTCAGTGCAAATGTGGTCGTTGAGGGTACAACTGTCAATTTAGGCCTCTGGGACACTGCTGGGCAAGAGGATTACAACAGATTGAGGCCTTTGAGCTATAGAGGAGCTGATGTTTTTGTCCTGGCTTTCTCTTTAGTTAGTCGTGCTAGCTACGAGAATGTACTGAAGAAGTGGATCCCTGAATTGCAGCATTTTGCCCCTGGCGTTCCTGTGGTATTAGTAGGCACCAAATTGGATCTCCGAGAAGATAAGTACTATCTAGCTGATCATCCTGGTCTAGTGCCTGTGACCACCGAGCAGGGTGAGGAACTCCGTAAACAGATTGGAGCTACCTATTACATTGAATGCAGCTCAAAAACTCAGCAGAATGTCAAGGCGGTGTTTGATGCTGCGATCAAGATGGTGATCAAGCCTCCTCCGAAACAGAGTGAGAAGAAGAAAAAACCGCCACGTGGAGGATGTCTGCTAAACTTTTGGTGTGGAAGCCGTCATGTTTCATCATAG 636 0.4607 MSATNSKFIKCVTVGDGAVGKTCMLMCYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDLREDKYYLADHPGLVPVTTEQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIKMVIKPPPKQSEKKKKPPRGGCLLNFWCGSRHVSS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0631 211 ProSiteProfiles small GTPase Ras family profile. 4 200 IPR001806 GO:0003924|GO:0005525
Mibi13g0631 211 SMART rho_sub_3 11 182 IPR001806 GO:0003924|GO:0005525
Mibi13g0631 211 PRINTS Transforming protein P21 ras signature 9 30 - -
Mibi13g0631 211 PRINTS Transforming protein P21 ras signature 157 179 - -
Mibi13g0631 211 PRINTS Transforming protein P21 ras signature 32 48 - -
Mibi13g0631 211 PRINTS Transforming protein P21 ras signature 49 71 - -
Mibi13g0631 211 PRINTS Transforming protein P21 ras signature 111 124 - -
Mibi13g0631 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 179 IPR027417 -
Mibi13g0631 211 Pfam Ras family 10 179 IPR001806 GO:0003924|GO:0005525
Mibi13g0631 211 ProSiteProfiles small GTPase Rho family profile. 2 179 - -
Mibi13g0631 211 Gene3D - 2 198 IPR027417 -
Mibi13g0631 211 CDD Rop_like 8 180 - -
Mibi13g0631 211 TIGRFAM small_GTP: small GTP-binding protein domain 7 173 IPR005225 GO:0005525
Mibi13g0631 211 ProSiteProfiles small GTPase Rab1 family profile. 4 211 - -
Mibi13g0631 211 PANTHER RHO FAMILY GTPASE 7 193 IPR003578 GO:0005525|GO:0007264
Mibi13g0631 211 SMART ras_sub_4 6 182 - -
Mibi13g0631 211 SMART rab_sub_5 9 182 - -
Mibi13g0631 211 FunFam Rac-like GTP-binding protein 3 2 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0631 Mibi-ChrMibi13 8258860 8261325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0631 7 182 EF-hand Containing Proteins AT5G27540 24.432 2.59e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0631 13 8258860 8261325 Mibi13g0631 13 8258860 8261325 ECH