Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0566 ATGGGCGAAGGTATAGAAGAGAATAGTGGTGGTGTTTCTCTACCATCTGGTCCAGACGCTAAGAAGAGAAGGGTAACCTATTTCTACGAACCCTCCATCGGCGATTACTACTATGGCCAAGGCCATCCCATGAAACCCCATCGCATTCGCATGGCCCACAATCTCATCGTCCATTACTACCTTCATCGCCGCATGGAAATCAATCGTCCGTTCCCCGCTTCCCCAGAAGACATTCGTCGTTTTCACACCGACGAATATGTCGACTTTCTTTCTTCCGTTTCGCCTGAGACCCTTGCTGAGAACACCTTCTCTCGTCAGCTCAAGCGATTCAATGTTGGCGAGGACTGTCCTGTCTTTGATGGGTTATTCGATTTTTGTCAGGCTTCTGCTGGTGGTTCAATTGGTGCTGCTGTTAAGTTGAACCGTGGTGATGCTGATATTGCCATTAATTGGGCTGGTGGTCTTCACCATGCTAAGAAGTCTGAGGCTTCTGGGTTTTGTTATGTCAATGATATTGTCCTCGGCATTCTTGAGCTGCTCAAGGTTCACAGGCGTGTATTATATGTTGACATTGATGTTCACCATGGAGATGGCGTTGAGGAAGCTTTCTATACAACTGATAGAGTGATGACAGTTTCTTTTCACAAGTTTGGGGATTTTTTCCCAGGCACTGGGCACATTAAAGACGTAGGGGTAGGTGCGGGGAAGAATTATGCTTTAAATGTCCCGTTGAATGATGGGATGGATGATGAAAATTTCTGTGGGTTATTCCGCCCCCTCATTCAGAAAGTCATGGAGGTGTATCAACCTGATGCAGTTGTTCTTCAATGTGGTGCTGATTCACTGTCTGGTGACAGGCTAGGCTGCTTCAATTTGTCTGTTAAGGGTCATGCAGATTGCCTTCGTTTCCTTAGATCTTTCAACGTTCCTTTGATGGTCTTGGGTGGGGGAGGATATACAATTAGGAATGTTGCTCGTTGCTGGTGTTATGAGACAGCGGTGGCTGTAGGTGTTGAACCTGATAACAAGTTGCCTTATAATGAATATTTTGAGTATTTCGGCCCAGACTACACTCTTCATGTTGATCCATGTAACATGGAGAACCTTAACTCACCAAAGGATATGGAAAAAATTAGGATCACACTAATAGAACAGCTCTCCAGACTTCCTCATGCACCCAGTGTGCCTTTTCAGACAACACCATCTACGATTGAAGTTCCAGAAGAGGTGGAAGAGGACATGGAACGAAGACCAAAACCTCGCATATGGAGTGGTGAACATTATGATTCTGATCACGATGAAGATGTGAAGACCAGTCCAAGATACTCAAGTATAAGGGATGATGTTCCTGATGAGATGGAGGAAGAGAAGCCAGAAAGGCCCCTATCATCCTGA 1395 0.4552 MGEGIEENSGGVSLPSGPDAKKRRVTYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYYLHRRMEINRPFPASPEDIRRFHTDEYVDFLSSVSPETLAENTFSRQLKRFNVGEDCPVFDGLFDFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGVGAGKNYALNVPLNDGMDDENFCGLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPCNMENLNSPKDMEKIRITLIEQLSRLPHAPSVPFQTTPSTIEVPEEVEEDMERRPKPRIWSGEHYDSDHDEDVKTSPRYSSIRDDVPDEMEEEKPERPLSS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0566 464 FunFam Histone deacetylase 21 400 - -
Mibi13g0566 464 PRINTS Histone deacetylase signature 131 151 IPR003084 GO:0004407|GO:0016575
Mibi13g0566 464 PRINTS Histone deacetylase signature 77 95 IPR003084 GO:0004407|GO:0016575
Mibi13g0566 464 PRINTS Histone deacetylase signature 231 244 IPR003084 GO:0004407|GO:0016575
Mibi13g0566 464 PRINTS Histone deacetylase signature 44 61 IPR003084 GO:0004407|GO:0016575
Mibi13g0566 464 PRINTS Histone deacetylase signature 110 127 IPR003084 GO:0004407|GO:0016575
Mibi13g0566 464 PRINTS Histone deacetylase signature 172 188 IPR003084 GO:0004407|GO:0016575
Mibi13g0566 464 PRINTS Histone deacetylase signature 248 266 IPR003084 GO:0004407|GO:0016575
Mibi13g0566 464 CDD HDAC_classI 28 335 - -
Mibi13g0566 464 MobiDBLite consensus disorder prediction 392 464 - -
Mibi13g0566 464 PANTHER HISTONE DEACETYLASE 2-RELATED 12 346 - -
Mibi13g0566 464 PRINTS Histone deacetylase superfamily signature 153 176 IPR000286 -
Mibi13g0566 464 PRINTS Histone deacetylase superfamily signature 270 280 IPR000286 -
Mibi13g0566 464 PRINTS Histone deacetylase superfamily signature 185 200 IPR000286 -
Mibi13g0566 464 Gene3D Histone deacetylase domain 21 396 IPR037138 -
Mibi13g0566 464 Pfam Histone deacetylase domain 42 333 IPR023801 -
Mibi13g0566 464 MobiDBLite consensus disorder prediction 410 464 - -
Mibi13g0566 464 PIRSF HDAC_I_euk 7 462 IPR003084 GO:0004407|GO:0016575
Mibi13g0566 464 SUPERFAMILY Arginase/deacetylase 23 388 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0566 Mibi-ChrMibi13 7435255 7438887 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0566 13 7435255 7438887 Mibi13g0566 13 7435255 7438887 ECH