Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0543 ATGGGTGGATCCATTTCAAAACGTCGTAGTGGGAGGCAACATTCGTATTCAAGGGCTAGTTCACATTCTTGGAATTACCCTCCACCTCAATCACCGTACGTGCAACAAAGCCAAGATCATTTGCCTCGTGAATATTACGGAACTCCTTCTCAAACCTATGGTGGTGGTGGTGCACCTGAATCGAAAAAGAGGTTGGAGAGGAAGTATTCTAAGATAGATGACAACTTTGTTACCTTGGACCAGGTAACCGAGGCTCTAGCAGGTGCTGGTTTAGAGTCTTCCAATCTAATTGTTGGTATTGACTTCACAAAGAGCAATGAGTGGACAGGTGCAAGATCGTTCCAAAGGAGAAGCTTGCATCATATTGGTCATGAACAAAATCCGTATGAACAAGCAATATCAATCATTGGGAAAACACTGTCTTCCTTTGATGAGGATAACCTGATCCCCTGTTTTGGATTTGGAGATGCATCAACCCATGACCAGGAAGTTTTTAGTTTTTATCCGGATGAGAGATTTTGTCAAGGGTTTGAAGAAGTGTTGAGCCGGTACCGAGAATTGGTTCCTGAATTAAAGCTTGCAGGGCCAACATCATTTGCCCCAGTCATTGAAATGGCAATAACTATAGTCGAGCAAAGTGGTGGCCAATACCATGTCTTGGTGATAATAGCAGACGGACAGGTGACAAGAAGTGTTGATACTGAGAAAGGGCAGCTAAGCATTCAGGAAAAACAAACCGTTGAAGCTATTGTGAAAGCAAGTGAATATCCCCTTTCAATTATATTAGTTGGAGTTGGAGATGGGCCATGGGACATGATGAAAGAATTTGATGATAACATACCAGCTCGGACCTTTGATAATTTCCAGTTTGTGAATTTTACTGAAATAATGTCAAAGAACATCGATGGATCCAGAAAAGAAACAGAATTTGCACTTGCTGCACTGATGGAAATACCTTCTCAATACAAGGCAACATTGGAACTTAATTTACTGGGAACTCGTAGAGGGAAAGCTATAGACAGGGTAGCTCTTCCCCCACCTCAGTATGGTGCTGCATCTGTGAACGCTCAAAAAGCTTCCCGTTCAACCAATTTTCATCCTAGTGCACCATCTGACACTGGCAGGCATCATAATACCAGCGCAAATTGCCCTGCAAGTTCTGCTTCTGATAATCACGTTTGTCCCATTTGCCTCTGTGAACCTAAGAATATGGCCTTTGGTTGTGGGCATCAGACTTGCTGTGAGTGCGGACAAGATCTAGAGACATGCCCCATTTGTAGGAGTACCATTGATACTCGAATAAGACTTTATTAG 1314 0.4292 MGGSISKRRSGRQHSYSRASSHSWNYPPPQSPYVQQSQDHLPREYYGTPSQTYGGGGAPESKKRLERKYSKIDDNFVTLDQVTEALAGAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDERFCQGFEEVLSRYRELVPELKLAGPTSFAPVIEMAITIVEQSGGQYHVLVIIADGQVTRSVDTEKGQLSIQEKQTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARTFDNFQFVNFTEIMSKNIDGSRKETEFALAALMEIPSQYKATLELNLLGTRRGKAIDRVALPPPQYGAASVNAQKASRSTNFHPSAPSDTGRHHNTSANCPASSASDNHVCPICLCEPKNMAFGCGHQTCCECGQDLETCPICRSTIDTRIRLY 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0543 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 371 437 IPR013083 -
Mibi13g0543 437 MobiDBLite consensus disorder prediction 1 62 - -
Mibi13g0543 437 Pfam Copine 118 332 IPR010734 -
Mibi13g0543 437 ProSiteProfiles Zinc finger RING-type profile. 394 427 IPR001841 -
Mibi13g0543 437 Pfam Zinc finger, C3HC4 type (RING finger) 391 432 - -
Mibi13g0543 437 CDD RING-HC_RGLG_plant 393 437 IPR045317 GO:0061630|GO:0070534
Mibi13g0543 437 MobiDBLite consensus disorder prediction 353 390 - -
Mibi13g0543 437 CDD vWA_copine_like 72 322 IPR010734 -
Mibi13g0543 437 Gene3D von Willebrand factor, type A domain 112 299 IPR036465 -
Mibi13g0543 437 PANTHER COPINE FAMILY PROTEIN 1 15 414 - -
Mibi13g0543 437 SMART VWA_4 93 296 IPR002035 -
Mibi13g0543 437 SUPERFAMILY vWA-like 95 277 IPR036465 -
Mibi13g0543 437 MobiDBLite consensus disorder prediction 16 45 - -
Mibi13g0543 437 MobiDBLite consensus disorder prediction 353 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0543 Mibi-ChrMibi13 7260891 7263786 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0543 13 7260891 7263786 Mibi13g0543 13 7260891 7263786 ECH