Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0522 ATGCCCGAATCACTGGAATCTCAAAATCACGTTTTGCTTCCAAAACCAGAGTTGGGAGTAGCAGAGACCTCCAACGTTCTCCGCCCTCCCAAGCTCGTCGTCTTGGCTGACCTCAACGTCGATCCTCCTGAAGTAGACGAAGATGATTCCCCCCATCTGCCTCCTCCTGAAATCACCATGTTAACAAATGAAACAAGTCAAGAGAAGAGTATATTGCCCAAAGACACCGATAACGCTGATGGCGAAGGTAAAAAATTGCACAAACTGGGGAAATGCCGCTCCAGATTTAGTAAGGCAGATTCCTCTGTGGATTGCGGAGCTGATGGAGATGGTGATCAGCATGTTCAAGGGGTTGCTTCCTCTCGAGAGGAAAAAGTTAGCAGTCTGAAGACCGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCACATGCTCATTTCATACTCGGCCTAATGTACCAAAGGTTGGGCCAACCTCAAAAGGCTCTATCAGCATATGAGAAGGCTGCAGAGATCTTACTTCGGTCAGAGGCTGAGATCAGTCGGCCAGAGTTGCTTTCTTTAGTTCAAATTCACCATGCACAGTGCCTGATACTAGAAAGTGCAGTGGAAAATAGTTCAGATAAAGAACTTGAACCTCAAGAACTTGAGGAAATTCTCTCCAAACAAAAGGAGTCTGTGCAATCAGATATCAGGCAGGCAGCTGTATGGAATACCTTAGGATTTGTCCTTCTTAAAACAGGTCGTTTGCAGAGTGCAATCACAGTACTGTCATCATTGTTGGCTATTGCACCAGACAACTATGATTGTTTGGGAAATCTGGGGATTTCTTATCTTCAAAGTGGGAATTTGGAATTATCTGCAAAGTGTTTCCAAGAGTTGGTTCTAAAAGATCAAAATCATCCTGCAGCTTTGATCAACTATGCTGCCCTTCTTTTATGTAAATATGCTTCAGTTATAGCAGGTGCTGGTGCATGTGCTTCAGAAGGTGCTTCTGCCGACCAGGTTGCTGCTGTTAATGTTGCAAAGGAATGTTTGCTAGCTGCAGTAAAAGCAGACCCCAAATCAGGACATATCTGGACAAATCTTGCCAATGCATTTTCTCTATGTGGTGATCATAAAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCGAGACTGGATCCCAGTTGCATGTCTACTCGATATGCCGTTGCCGTCCATAGAATAAAGGATGCTGAAAGATCTCTAGATCGGGAGCAGCTTTCCTGGGCTGGAAATGAGATGGCTTCTATAATAAGAGATTGTGATTCATCCTTGGTTGAGCTTCCTGTAGCATGGGCTGGGCTTGCCATGGTTCACAAGGCCCAACATGAAATAGCAGCCGCTTTTGAGACTGAACAGCATGACCTGATGGAAGTTGAAGAGCGCGCTGTTTGCATTTTAAAACAGGCTATAGCAGAAGATCCAGATGATGCTGTGCAGTGGCATCAACTTGGTCTTCATGGTCTCTGCACTCGGCAATTCAAAACATCTCAAAAGTACCTCAAAGCTGCTGTTGCTCGTGACCAGAGTAGCAGCTATGCATGGTCAAATCTAGGTGTTTCACTTCAACTATCAGAAGAGCCATCAAAAGCTGAAGAAGTATATAAGCAGGCATTGGCACTGGCGACAACACAACAAGCGCATGCTATATTATCCAATCTGGGGAATCTCTATCGCCAGCAGAAACAATATCAACGTGCCAAGGCAATGTTTACAAAGTCACTTGAACTACAACCTGGCTACGCTCCTGCATATAACAATCTGGGTCTTGTTTTTATTGCCGAGGGTCTTTGGGAAGAGGCCAAGCATTGTTTTGACAAGGCCCTCCAATCAGATCCATTACTGGATGCAGCAAAGTCTAACGAGATTAAGGCAGTTACCATGTCAAAGTTATGCAGAGGCCTTTCCTCATGCAATCTTAAAGAATAA 1953 0.4485 MPESLESQNHVLLPKPELGVAETSNVLRPPKLVVLADLNVDPPEVDEDDSPHLPPPEITMLTNETSQEKSILPKDTDNADGEGKKLHKLGKCRSRFSKADSSVDCGADGDGDQHVQGVASSREEKVSSLKTGLVHVARKMPKNAHAHFILGLMYQRLGQPQKALSAYEKAAEILLRSEAEISRPELLSLVQIHHAQCLILESAVENSSDKELEPQELEEILSKQKESVQSDIRQAAVWNTLGFVLLKTGRLQSAITVLSSLLAIAPDNYDCLGNLGISYLQSGNLELSAKCFQELVLKDQNHPAALINYAALLLCKYASVIAGAGACASEGASADQVAAVNVAKECLLAAVKADPKSGHIWTNLANAFSLCGDHKSSSKCLEKAARLDPSCMSTRYAVAVHRIKDAERSLDREQLSWAGNEMASIIRDCDSSLVELPVAWAGLAMVHKAQHEIAAAFETEQHDLMEVEERAVCILKQAIAEDPDDAVQWHQLGLHGLCTRQFKTSQKYLKAAVARDQSSSYAWSNLGVSLQLSEEPSKAEEVYKQALALATTQQAHAILSNLGNLYRQQKQYQRAKAMFTKSLELQPGYAPAYNNLGLVFIAEGLWEEAKHCFDKALQSDPLLDAAKSNEIKAVTMSKLCRGLSSCNLKE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0522 650 Pfam Tetratricopeptide repeat 144 173 IPR013105 -
Mibi13g0522 650 Pfam Tetratricopeptide repeat 590 621 IPR013105 -
Mibi13g0522 650 Gene3D Tetratricopeptide repeat domain 198 464 IPR011990 GO:0005515
Mibi13g0522 650 ProSiteProfiles TPR repeat profile. 590 623 IPR019734 GO:0005515
Mibi13g0522 650 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 30 647 - -
Mibi13g0522 650 SMART tpr_5 358 391 IPR019734 GO:0005515
Mibi13g0522 650 SMART tpr_5 269 302 IPR019734 GO:0005515
Mibi13g0522 650 SMART tpr_5 520 553 IPR019734 GO:0005515
Mibi13g0522 650 SMART tpr_5 556 589 IPR019734 GO:0005515
Mibi13g0522 650 SMART tpr_5 144 177 IPR019734 GO:0005515
Mibi13g0522 650 SMART tpr_5 235 268 IPR019734 GO:0005515
Mibi13g0522 650 SMART tpr_5 590 623 IPR019734 GO:0005515
Mibi13g0522 650 ProSiteProfiles TPR repeat profile. 235 268 IPR019734 GO:0005515
Mibi13g0522 650 SUPERFAMILY TPR-like 212 621 IPR011990 GO:0005515
Mibi13g0522 650 ProSiteProfiles TPR repeat profile. 556 589 IPR019734 GO:0005515
Mibi13g0522 650 Pfam Tetratricopeptide repeat 522 586 - -
Mibi13g0522 650 ProSiteProfiles TPR repeat region circular profile. 590 621 - -
Mibi13g0522 650 Pfam Tetratricopeptide repeat 245 304 - -
Mibi13g0522 650 Gene3D Tetratricopeptide repeat domain 128 191 IPR011990 GO:0005515
Mibi13g0522 650 SUPERFAMILY TPR-like 137 177 IPR011990 GO:0005515
Mibi13g0522 650 MobiDBLite consensus disorder prediction 41 83 - -
Mibi13g0522 650 Gene3D Tetratricopeptide repeat domain 558 621 IPR011990 GO:0005515
Mibi13g0522 650 ProSiteProfiles TPR repeat profile. 144 177 IPR019734 GO:0005515
Mibi13g0522 650 Gene3D Tetratricopeptide repeat domain 469 557 IPR011990 GO:0005515
Mibi13g0522 650 Pfam Tetratricopeptide repeat 359 391 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0522 436 622 Glycosyltransferase AT3G04240 26.064 3.16e-11 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0522 13 7101582 7106572 Mibi13g0522 13 7101582 7106572 ECH