Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi12g2087 | ATGGTGCTCGAGGCGACAATGATCTGTATTGACAATTCCGAATGGATGCGTAACGGGGATTACGCACCTACACGATTTCAAGCTCAAGCAGATGCTGTCAATCTTATCTGCGGTGCTAAAACACAGTCTAATCCAGAAAATACAGTCGGAGTTCTCACAATGGCAGGGAAGGGAGTTCGGGTTTTGGTGACTCCCACCAGTGATCTGGGCAAGATCTTAGCTTGCATGCATGGACTAGAAATCGGTGGGGAAATGAACCTAGCCTCCGGCATTCAAGTGGCACAATTGGCTCTCAAGCACCGACAAAATAAGAAACAGCAGCAAAGAATTATCGTTTTTGCTGGAAGTCCTGTCAAGCATGAGAAGAAGATGCTGGAGATGATTGGGAGAAGACTAAAAAAGAACAGCGTAGCCCTTGACATTATCAATTTTGGTGAAGAAGATGAAGGCAAGACTGAAAAGCTGGAGGCACTTCTAGCAGCCGTTAATAATAATGATACAAGCCACATTGTCCATGTTCCAGCTGGTCCCAACGCTCTTTCTGATGTGCTTATAAGTACACCTATTTTTACGGGAGATGGGGAAGGTGGAAGTGGTTTTGCCGCTGCAGCTGCTGCAGCTGCAGCTGGTGGTGTATCTGGTTTTGAATTTGGTGTGGATCCAAACTTGGATCCTGAGCTAGCTCTCGCTTTAAGAGTTTCAATGGAAGAGGAGAGGGCCAGACAGGAGGCAGCTGCTAAAAAGGCTGCTGAGGATGCTGCAAAACAGGAGAAAGGAGGTGACCAGCAAGCCACTTCACAAGATGCAACAATGACTGAACGAACCAGTGCCGGAACATCTGAAGCTGATAACAAGGCAAATGATTTGATGGAAGATGAGAACGCTCTCCTGCAGCAAGCACTTGCAATGTCAATGGATGATCCTGCCATTAACCATGACTCAAGAGATACAGATATGTCAGAAACAACTGCCGAAGATCCCGATTTGGCCCTTGCCCTGAAATTGTCGGTTACAGACAATACAAAGGACTCAGCAAGCCAGTCGGACATGAGTAAATTGTTGGCTGATCAGTCTTTCGTATCTTCTATTCTTGCCTCACTTCCTGGAGTTGACCCAAATGACCCGTCTGTCAAAGATCTGCTGGCCTCCATGCAAAGTCAGTCTGAGCCCCAGCAGAAGAATGAAGATAAGCCGCCAAATGAGGAGGAGAAGAAATAA | 1218 | 0.4672 | MVLEATMICIDNSEWMRNGDYAPTRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLASGIQVAQLALKHRQNKKQQQRIIVFAGSPVKHEKKMLEMIGRRLKKNSVALDIINFGEEDEGKTEKLEALLAAVNNNDTSHIVHVPAGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDAAKQEKGGDQQATSQDATMTERTSAGTSEADNKANDLMEDENALLQQALAMSMDDPAINHDSRDTDMSETTAEDPDLALALKLSVTDNTKDSASQSDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSEPQQKNEDKPPNEEEKK | 405 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi12g2087 | 405 | ProSiteProfiles | VWFA domain profile. | 5 | 189 | IPR002035 | - | |
| Mibi12g2087 | 405 | PANTHER | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 | 1 | 397 | - | - | |
| Mibi12g2087 | 405 | MobiDBLite | consensus disorder prediction | 242 | 284 | - | - | |
| Mibi12g2087 | 405 | Gene3D | - | 220 | 306 | - | - | |
| Mibi12g2087 | 405 | MobiDBLite | consensus disorder prediction | 365 | 405 | - | - | |
| Mibi12g2087 | 405 | Gene3D | von Willebrand factor, type A domain | 3 | 186 | IPR036465 | - | |
| Mibi12g2087 | 405 | SUPERFAMILY | vWA-like | 4 | 175 | IPR036465 | - | |
| Mibi12g2087 | 405 | MobiDBLite | consensus disorder prediction | 379 | 393 | - | - | |
| Mibi12g2087 | 405 | Pfam | von Willebrand factor type A domain | 6 | 115 | IPR002035 | - | |
| Mibi12g2087 | 405 | Pfam | Ubiquitin interaction motif | 325 | 336 | IPR003903 | - | |
| Mibi12g2087 | 405 | Pfam | Ubiquitin interaction motif | 224 | 237 | IPR003903 | - | |
| Mibi12g2087 | 405 | Pfam | Ubiquitin interaction motif | 292 | 307 | IPR003903 | - | |
| Mibi12g2087 | 405 | MobiDBLite | consensus disorder prediction | 242 | 258 | - | - | |
| Mibi12g2087 | 405 | MobiDBLite | consensus disorder prediction | 259 | 283 | - | - | |
| Mibi12g2087 | 405 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 222 | 241 | IPR003903 | - | |
| Mibi12g2087 | 405 | FunFam | 26S proteasome non-ATPase regulatory subunit 4 | 3 | 186 | - | - | |
| Mibi12g2087 | 405 | FunFam | 26S proteasome regulatory subunit N10 | 220 | 306 | - | - | |
| Mibi12g2087 | 405 | SMART | uim | 292 | 311 | IPR003903 | - | |
| Mibi12g2087 | 405 | SMART | uim | 222 | 241 | IPR003903 | - | |
| Mibi12g2087 | 405 | SMART | uim | 324 | 343 | IPR003903 | - | |
| Mibi12g2087 | 405 | SMART | VWA_4 | 2 | 175 | IPR002035 | - | |
| Mibi12g2087 | 405 | Coils | Coil | 232 | 257 | - | - | |
| Mibi12g2087 | 405 | CDD | VWA_26S_proteasome_subunit | 1 | 188 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mibi12g2087 | 12 | 37352995 | 37357721 | Mibi12g2087 | 12 | 37352995 | 37357721 | ECH |