Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2060 ATGGCGTCTCAGGACAAATCCCCTGGATCTGGATCTGGATCTGCAGCGGCCAATGGCGACGTGCAGCGCAAGGTGGCATTGATCACCGGAATCACGGGCCAAGATGGGTCCTACCTCACTGAATTCCTCCTCAACAAAGGCTACGATGTCCACGGCCTCATTCGCCGATCCTCCAACTTCAACACCCAACGAATCAACCACATCTACATCGATCCCCACAACACCCACAAGGCTCGAATGAAGCTCCATTACGCCGATCTCTCCGACGCCTCCTCCCTCCGCCGATGGCTCGACACAATCCTCCCCGACGAGGTTTACAACCTCGCCGCCCAGTCCCATGTCGCCGTCTCCTTCGAGATCCCAGATTACACCGCCGATGTTGTCGCCACTGGGGCCCTCCGTCTCTTGGAGGCTGTTCGCTCTCACATCGCCGCCACTGGTCGTAGCCATATTCGCTATTACCAGGCCGGATCCTCTGAAATGTTCGGCTCAACGCCGCCTCCCCAGTCCGAAACGACGCCGTTTCACCCTCGCTCTCCTTACGCGGCTTCGAAATGTGCCGCGCATTGGTATACTGTTAATTATCGCGAGGCTTATGGGCTTTTTGCCTGTAATGGGATACTGTTTAACCATGAATCGCCGAGGCGTGGTGAGAATTTCGTGACGAGGAAGATCACGCGAGCTGTGGGTAGGATTAAGATTGGTTTGCAGAGGAAATTGTTCTTGGGGAATCTGCAGGCTTCGAGGGATTGGGGTTTTGCTGGGGATTATGTGGAGGCTATGTGGATGATGCTGCAGCAGGAGAAGCCGGATGATTATGTTGTGGCCACGGAGGAATCACACACTGTGGAGGAGTTCTTGGAGGTTGCGTTTGGATATGTGGGTTTGAATTGGAGGGATCATGTGGAGATTGACAAGAGGTACTTTAGGCCTGCGGAGGTTGACAATCTCAAGGGGGATTCAAGCAAGGCTAGGAAAGTTCTCGGGTGGAAGCCTAAGGTGGGGTTTGAGCAGCTGGTGAAGATGATGGTGGATGAGGACGTTGAATTGGCCAAGAGGGAGAAGGTGCTTGTTGATGCTGGCTACTTGGATGCTCAGCAACAGCCTTGA 1110 0.5423 MASQDKSPGSGSGSAAANGDVQRKVALITGITGQDGSYLTEFLLNKGYDVHGLIRRSSNFNTQRINHIYIDPHNTHKARMKLHYADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQRKLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWRDHVEIDKRYFRPAEVDNLKGDSSKARKVLGWKPKVGFEQLVKMMVDEDVELAKREKVLVDAGYLDAQQQP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2060 369 Gene3D - 217 343 - -
Mibi12g2060 369 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 24 350 IPR006368 GO:0008446|GO:0019673
Mibi12g2060 369 Hamap GDP-mannose 4,6-dehydratase [gmd]. 24 353 IPR006368 GO:0008446|GO:0019673
Mibi12g2060 369 Gene3D - 27 333 - -
Mibi12g2060 369 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 16 359 IPR006368 GO:0008446|GO:0019673
Mibi12g2060 369 FunFam GDP-mannose 4,6-dehydratase 27 225 - -
Mibi12g2060 369 CDD GDP_MD_SDR_e 25 349 - -
Mibi12g2060 369 Pfam GDP-mannose 4,6 dehydratase 27 343 IPR016040 -
Mibi12g2060 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 349 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2060 25 209 Miscellaneous Gene Families AT4G12250 29.016 2.98e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2060 12 37118056 37119165 Mibi12g2060 12 37118056 37119165 ECH