Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2057 ATGTCGTCCGCCGGAGAAGGTGATCGTGCTGCCGTTGATCAGCCTAAGGCAGTGATGAAGGAGAAGAAGCCCAAGGTTCCAAAGGAGAAGAAGTCCAAGAAAGCCAAAACAGTTTCTCATCCTCCTTACTTTCAGATGATCAAGGAGGCTTTGTTGGCTCTGAAGGAGAAGGGTGGTTCCAGCCCATACGCCATAGCCAAGAAGATCTTGGCTCTTCAGCTTAAGAATCAGGCCGCGAGAGGCAAATTGATCCAGATCAAGGCTTCCTACAAGCTATCCTCTGACGTAGCCAAGGTCCCAAAGTCCACCACACAGAACACTAAGCGCTCTAAGCCAAGCGTGGCTAAGAAGACAGAGAAAGTGAAGAAGGCAGGGAAGAAAGTCGTTGGGATGAAGAAGACGAAGAAATCATCGAAATCTGCGAAGCCAAAGCAGCCAAAGTCACTGAAATCATCAGCAACCAAGAGGGCCAGAAAAGTGACTGCCTCTGCTTCATGA 498 0.492 MSSAGEGDRAAVDQPKAVMKEKKPKVPKEKKSKKAKTVSHPPYFQMIKEALLALKEKGGSSPYAIAKKILALQLKNQAARGKLIQIKASYKLSSDVAKVPKSTTQNTKRSKPSVAKKTEKVKKAGKKVVGMKKTKKSSKSAKPKQPKSLKSSATKRARKVTASAS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2057 165 MobiDBLite consensus disorder prediction 93 165 - -
Mibi12g2057 165 MobiDBLite consensus disorder prediction 1 40 - -
Mibi12g2057 165 SUPERFAMILY "Winged helix" DNA-binding domain 36 101 IPR036390 -
Mibi12g2057 165 PANTHER HISTONE H1 19 155 - -
Mibi12g2057 165 MobiDBLite consensus disorder prediction 120 154 - -
Mibi12g2057 165 Gene3D - 34 103 IPR036388 -
Mibi12g2057 165 SMART h15plus2 37 89 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi12g2057 165 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 39 133 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi12g2057 165 MobiDBLite consensus disorder prediction 96 111 - -
Mibi12g2057 165 PRINTS Histone H5 signature 26 47 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mibi12g2057 165 PRINTS Histone H5 signature 132 146 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mibi12g2057 165 PRINTS Histone H5 signature 53 70 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mibi12g2057 165 CDD H15 37 101 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi12g2057 165 Pfam linker histone H1 and H5 family 40 71 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2057 Mibi-ChrMibi12 37084669 37093642 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2057 12 37084669 37093642 Mibi12g2057 12 37084669 37093642 ECH