Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2004 ATGAAGAAAATATCATTAGCTCTGCTTCTGGCCATTTTAATCTATCAGAGCTCAGTTCATGTTCTTGTGGATGCAGGGGATGGCTTCATCAGAAGCAGAGGTACCCATTTTATGTTGAATGGATACCCTTTTTACGCAAATGGCTTCAATGCCTACTGGCTAATGTATACAGCCTCAGACCCATCTCAAAGGTTCAAAGTTTCTGCTGCTTTCCGTGAAGCCACTAACCATGGCCTTACTATTGCAAGAACTTGGGCATTCAGTGATGGTGGCTACAGACCCTTGCAGTATTCCCCTGGTTTCTATAATGAGCAAATGTTCAAGGGGCTAGATTTCGTCATAGCAGAGGCTAGGAAGCATGGGATCAAGCTTATATTGAGCTTTGTGAACAACTATGAGAGTTTTGGAGGGAAGCAGCAGTATGTGAACTGGGCTAGAAGTAAGGGACAGTACCTAACTTCAGATGATGATTTCTTCAGGAGCCCTGTTGTAAAGGGTTACTACCGAAACCATGTCAAGACTGTTATTAACAGATTTAATAGCTTCACGGGAATTCATTACAAAGATGATCCAACAATTATGGCGTGGGAGCTGATGAATGAGCCCAGATGCACATCAGATCCTTCTGGAAGGACTATCCAGGCTTGGATAGCGGAAATGGCTTCCTTTGTAAAGTCCATGGACAGAAATCACTTATTGGAAGCTGGGTTAGAAGGATTTTATGGACAGTCAACACCTCAGAGAAAGAGATTGAATCCTGGTTTTGACATAGGAACGGACTTCATTGCAAATAATCGAATCCCTGGCATTGATTTCGCAACAGTTCACTGTTATCCTGATCAGTGGTTATCCAACACCAATGATCAATATCAGCTTTCGTTCGTGAATAACTGGCTGGGTGCACACTTTTTAGATGCTCAGTACGCTCTCAGGAAGCCAATACTTGTAGCAGAATTTGGGAAATCATGGAAAGATGCAGGTTATAGCAATTACAAGAGAGATGAGATATTCAATAGTGTGTACTACAAGATATATGCTTCTGCTAAACGAGGTGGGGCAGCAGGTGGTGCCATGTTCTGGCAGCTTCTTACAGAAGGAATGGAGTCTTTTCAAGATGGTTATGGGCTAATGCTAGGCCAGAGTTCTTCCACAGCAAATGTCATTGTTCAGCAATCTCACAGGTTATACCAACTTCGGAAGATATTTGCAAGAATGAGGAACATGCACAGATGGAAGAGGGCACGAGGAAAAACAAATGGTCACAGAGGAAGGCGAATTGGGAACTGA 1287 0.4305 MKKISLALLLAILIYQSSVHVLVDAGDGFIRSRGTHFMLNGYPFYANGFNAYWLMYTASDPSQRFKVSAAFREATNHGLTIARTWAFSDGGYRPLQYSPGFYNEQMFKGLDFVIAEARKHGIKLILSFVNNYESFGGKQQYVNWARSKGQYLTSDDDFFRSPVVKGYYRNHVKTVINRFNSFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASFVKSMDRNHLLEAGLEGFYGQSTPQRKRLNPGFDIGTDFIANNRIPGIDFATVHCYPDQWLSNTNDQYQLSFVNNWLGAHFLDAQYALRKPILVAEFGKSWKDAGYSNYKRDEIFNSVYYKIYASAKRGGAAGGAMFWQLLTEGMESFQDGYGLMLGQSSSTANVIVQQSHRLYQLRKIFARMRNMHRWKRARGKTNGHRGRRIGN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2004 428 FunFam Mannan endo-1,4-beta-mannosidase 6 26 399 - -
Mibi12g2004 428 SUPERFAMILY (Trans)glycosidases 29 387 IPR017853 -
Mibi12g2004 428 PANTHER - 7 418 IPR045053 GO:0004553
Mibi12g2004 428 Gene3D Glycosidases 25 399 - -
Mibi12g2004 428 Pfam Cellulase (glycosyl hydrolase family 5) 46 326 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2004 Mibi-ChrMibi12 36268612 36270631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2004 1 428 Glycoside Hydrolase AT5G66460 66.821 0.0 605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2004 12 36268612 36270631 Mibi12g2004 12 36268612 36270631 ECH