Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1973 ATGGTCACCATCACCGAATTCGCTTTTACGCGAAGTACAAGCCAGGTGTCATTCTCCAATCTCCACCTTCCTCGCCCTACGCAGCCAATAATAGTGCGTGGGGAGCAAATAAGACCGATCGATGCAGTAAATGTAATCACTGTCGTCGTCGTTTCCATCAAGCTTTTACCGAGCGCTCCTTCTGCATCAGAATTCAGAAGGTACGACGGAATGGTTCACAGTGCCTATGATTCCTTCCAACTCCTCGACAATTCTCCCTCCAAGATCGAAGCTGTCGAATCTTACGGCTCTAAGCTCCTCCTTGGCTGCTCCGATGGCTCCCTTCGAATCTACGCTCCTCCATCCTCCGATCCCGATCTCTCTCCGTCGTCCGATCAGGAGCTTCGGAAGGAAGCCTACGTGCTTGAAAGAAGTTTGACTGGTTTTGCCAAGAAGCCTATCTTGTCAATGGAGGTCTTGGAATCCAGGGAATTGCTACTTTCACTTTCCGATTCTATTGCTTTTCACCGTCTTCCTAGTTTTGAAACCATTGCAGTCATCACCAAGGCCAAGGGCGCCAATGTCTTCTCCTGGGATGACCGAAGAGGTTTCTTATGCTTTGCCAGGCAAAAGAGGGTCTGTATTTTCAGACACGATGGTGGCAGAGGGTTTGTGGAGGTGAAAGAATTTGGTGTTCCAGATGTGGTGAAGTCGATGTCTTGGTGCGGTGAAAATATATGTCTGGGGATTAGAAGAGAATATTTAATACTAAATGCTACAAATGGTGCATTGTCTGAGGTATTTACCTCTGGGAGACTAGCGCCGCCTCTAGTAGTTTCTCTACCTTCTGGGGAACTTCTTCTTGGAAAGGAGAACATTGGGGTCTTTGTGGACCAAAATGGGAAACTTCTTCCAGAAGGTAGGATTTGTTGGTCAGAGGCTCCTGCAGAAGTTGTAATCCGGAGACCATATGGAATAGCCCTGCTGCCAAGATTTGTAGAGGTTCGATCCCTTCGAGATCCATTTCCACTTATACAGACTGTTGTTCTTCGAAATGTTCGTCATCTTCGCCAGAGCAACAATTCTGTGATTCTTGCATTAGATAATTCCGTTCATGGACTCTTCCCTGTTCCTCTTGGAGCCCAGATTGTCCAATTAACAGCATCTGGCGACTTTGAAGAAGCTCTGTCATTGTGCAAACTCCTTCCACCTGAAGATTCGAATCTCCGTGCTGCAAAAGAGGGTTCAATCCATATAAGATATGCTCACTATCTTTTTGAAAATGGGAGCTATGAGGAAGCAATGGAACAATTTCTTGCATCTCAAGTAGATATAACTTATGTTCTTTCTCTGTATCCATCCATTATACTTCCCAAGACAATCATTGTTAATGAGGCAGAGAAGTTGGGGGACTTTTCCTTGGATGCATCATATCTCTCTAGAGATTCTTCAGGTCTGTCAGATGATATAGAAGCCTCACCAACACCATCTTTGTCAGAATCTGATGCTGCACTTGAATCCAAAAAGATGAGTCATAATATGCTTATGGCTCTCATAAAGTATTTGCAGAAAAAGAGATTTAGTGTTATTGAGAAGGCCACTGCTGAGGGGACAGAAGAGGTTGTTTTAGATGCAGTTGGGGACAACTTACTATCCTATAATAGTAGTAGGTTAAAGAAAACAAACAAGGGTCGTGGCAGTGTTCCTGTTAGTTCAAGAGCTAGGGAGATGGCTACATTATTGGACACTGCACTTCTCCAAGCGTTGATTCTTACTGGACAATCTTCCTCTGCTCTAGAACTACTTAGAGTTCCTAACTACTGTGATTTGAAGATATGTGAAGAGATTCTTCGTAAAGGCAGCAATAATGTTGCTTTATTAGAACTTTACAAGTGCAATTCAATGCACCGAGAAGCTCTCGAGCTCCTTCATCAGTTGCTGGAGGAGTCAAAGTCAACCCCGTCCGAAGTTACACATAAGTTAAAGCCTGAGGCAATTATTGAGTATCTCAAGCCTCTGTGTAATTCAGACCCCATGCTTGTTCTGGAGTACTCAATGCTTGTTGTTGAAAGCTGTCCTACACAAACTATTGAGCTCTTTCTCTCTGGAAATATTCCTGCTGATATGGTGAACTCCTATTTGAAGCAACATTCTCCAAATATGCAGACTACTTACTTGGAACTCATGCTTGCAATGAATGAGAGTGCTGTCTCTGGAAATTTGCAAAATGAAATGGTACAAATCTATCTTTCTGAAGTACTAGAGTGGCATGCTGATTTAAGTGTGAAACAGAAATGGGATGAGAAAGCTTTCTCCCCGACAAGGAAGAAATTATTGTCTGCTTTAGAGAGTATATCAGGATACAATCCAGAAGCTCTATTGAAACGTCTTCCACCAGATTCTCTATACGAGGAGCGTGCTGTACTGTTGGGTAAAATGAACCAGCATGAATTGGCACTGTCTTTATATGTTCATAAGCTTCATGTTCCAGAATCAGCATTGTCTTATTGTGATCGGGTTTATGAATGTACAAATCATCCATCAGGAAAATCTCCCAGCAACATTTACTTATCTCTTCTGCAAATCTATTTAAATCCACAAAGGGCCACTAACAGTTTTGAAAAGAGAATCACAAATCTATTATCCACCCAGAATACAAGCATTCCAAAGGTTAGCCATATGACATCAATAAAACATAAAGCAGGCCGAGGAACTAAGAAGATTGCAGCAATAGAAGGTGCAGAGGACACAAAAGTTAATTTGAGCAGCACTGATAGTAGCCGAAGTGATGGTGATCTGGATGAAAGTAGTGAGGAAAGTGGTAGTACTATCATGCTTGATGAAGTTCTTGATTTGTTGAGTCGCAGATGGGACAGAATAAATGGAGCTCAGGCCCTCAAACTTTTGCCAAGAGAAACAAGACTACAGAACTTGCGTCCATTTCTTGGACCTCTTGTACGAAAATCTAGTGAAATGTACCGTAATTACTCAGTGATCAAGAGCTTGAGACAAAGCGAGAACCTTCAGGTGAAAGATGAACTCTATAATCAGAGGAAAGCAGCTGTGAAGATAACCGGTGACAGCATGTGTTCACTTTGCCATAAGAAGATAGGAACTAGTGTATTTGCTGTCTACCCCAACGGAAAAACGCTTGTGCACTTTGTCTGTTTCCGAGATTCTCAGAGCATGAAAGCTGTGGCCAAAGGGTCGTCATTGAGGAAGCGGGTATAG 3210 0.429 MVTITEFAFTRSTSQVSFSNLHLPRPTQPIIVRGEQIRPIDAVNVITVVVVSIKLLPSAPSASEFRRYDGMVHSAYDSFQLLDNSPSKIEAVESYGSKLLLGCSDGSLRIYAPPSSDPDLSPSSDQELRKEAYVLERSLTGFAKKPILSMEVLESRELLLSLSDSIAFHRLPSFETIAVITKAKGANVFSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGENICLGIRREYLILNATNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPAEVVIRRPYGIALLPRFVEVRSLRDPFPLIQTVVLRNVRHLRQSNNSVILALDNSVHGLFPVPLGAQIVQLTASGDFEEALSLCKLLPPEDSNLRAAKEGSIHIRYAHYLFENGSYEEAMEQFLASQVDITYVLSLYPSIILPKTIIVNEAEKLGDFSLDASYLSRDSSGLSDDIEASPTPSLSESDAALESKKMSHNMLMALIKYLQKKRFSVIEKATAEGTEEVVLDAVGDNLLSYNSSRLKKTNKGRGSVPVSSRAREMATLLDTALLQALILTGQSSSALELLRVPNYCDLKICEEILRKGSNNVALLELYKCNSMHREALELLHQLLEESKSTPSEVTHKLKPEAIIEYLKPLCNSDPMLVLEYSMLVVESCPTQTIELFLSGNIPADMVNSYLKQHSPNMQTTYLELMLAMNESAVSGNLQNEMVQIYLSEVLEWHADLSVKQKWDEKAFSPTRKKLLSALESISGYNPEALLKRLPPDSLYEERAVLLGKMNQHELALSLYVHKLHVPESALSYCDRVYECTNHPSGKSPSNIYLSLLQIYLNPQRATNSFEKRITNLLSTQNTSIPKVSHMTSIKHKAGRGTKKIAAIEGAEDTKVNLSSTDSSRSDGDLDESSEESGSTIMLDEVLDLLSRRWDRINGAQALKLLPRETRLQNLRPFLGPLVRKSSEMYRNYSVIKSLRQSENLQVKDELYNQRKAAVKITGDSMCSLCHKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKGSSLRKRV 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1973 1069 MobiDBLite consensus disorder prediction 477 496 - -
Mibi12g1973 1069 ProSiteProfiles Citron homology (CNH) domain profile. 86 356 IPR001180 -
Mibi12g1973 1069 Pfam CNH domain 97 349 IPR001180 -
Mibi12g1973 1069 PANTHER CNH DOMAIN CONTAINING 71 1056 IPR032914 GO:0016192
Mibi12g1973 1069 MobiDBLite consensus disorder prediction 910 933 - -
Mibi12g1973 1069 Pfam Region in Clathrin and VPS 702 832 IPR000547 GO:0006886|GO:0016192
Mibi12g1973 1069 Pfam Vacuolar sorting protein 39 domain 2 943 1051 IPR019453 -
Mibi12g1973 1069 Pfam Vacuolar sorting protein 39 domain 1 574 681 IPR019452 -
Mibi12g1973 1069 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 677 864 IPR000547 GO:0006886|GO:0016192
Mibi12g1973 1069 SUPERFAMILY WD40 repeat-like 95 245 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1973 Mibi-ChrMibi12 36003491 36011982 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1973 12 36003491 36011982 Mibi12g1973 12 36003491 36011982 ECH