Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1954 ATGGTGAATGCAATGACCAAAGGTGGCGGCGTAGAAGATAACAGCAACTTCAATAAATATGCTTGTGCCTGTGCTATCGTCGCTTCCATGATATCCATCATATTTGGCTATGATACGGGTGTTATGAGTGGAGCTATGATATTCATAAAGGAAGACCTTAAAATCAACGACACACAAGTGGAGGTCCTTGCAGGAATCCTTAATCTGTGCGCATTAGTTGGAACCTTAACTGCAGGAAAAACATCAGATTACATAGGTCGCAGGTACTCCATAGTACTGGCCTCCATTCTCTTCCTCCTAGGTTCACTTCTCATGGGCTACGGCCCAAACTACACAGTTCTAATGGCAGGAAGATGTACTGCTGGTATTGGCGTAGGCTTTGCCCTGCTCGTAGCCCCTGTTTACTCTGCAGAAATTTCCTCTGCTTCTTCCCGTGGTTTTCTCACCTCTCTTCCCGAACTATGTCTCGGTATAGGAATCCTTCTTGGTTATATCTCCAACTACCTCTTTGGTAAATCATTACCTCTAAAACTTGGCTGGAGATTCATGCTTGGTATTGCAGCCATTCCTTCTCTTGTTTTAGCTCTTGGAATTCTCAAAATGCCAGAATCTCCAAGATGGCTTGTCATGAGAGGAAAACTAGGAGAAGCCAAGAACGTGTTGTTGCAGATTTCTAATACCCCAGAAGAAGCTGAACTACGCTTCAACGATATCAAAGTAGCTGCTGGGATTTACGACGAGGCTTGCCAAAACGCCGTCGTTAAACGTGAAAGTGTATGGAAAGAGTTGATTTTGAGGCCTTCACATTGTGTCCGTTGGATGCTGGTCACAGCCGTTGGGATTCATTTCTTTGAACATGCGACTGGTATAGAGGCTGTGATGTTATATAGCCCAAGAATCTTCAAACAAGCTGGTGTCATCTCTAAGGACAAGCTTTTACTCGCAGTTATTGGAATCGGAGTTACTAAGGTTGTATGTTTGATCATAGCCACTGTGTTGCTAGACAGAGCTGGAAGAAGACGACTTTTGCTGATAAGTCTTGGAGGTATGATATGTGCACTTTCAGTTTTGGGATTTAGCTTGACTATGGCGGATCATTCTGCAGAGAAGCTGGTTTGGGCCTTGGCCCTGAGCATAGCGTCCACTTATATTACTGTTGGGTTCTTTAATATTGGGCTTGGGCCGGTGACTTGGGTGTACAGCTCTGAGATATTCCCTTTGAGGTTGAGGGCACAAGGGGCAAGTATTGGGGTTGCTGTGAACAGAGTGGTGAATGCGAGTGTTTCTATGAGTTTTATTTCCATCAATAAGACAATCACTATTGGTGGGACCTTCTTCATGTTTGCTGCTATATCTGCATTGGCTTGGGCCTTCTTCTTCTTCTTCCTCCCAGAAACCAAAGGCAAGTCCTTGGAAGAGATGGAGAAACTTTTCACTAAAAATAAAAATAATAATTGTAAAGCTGTACCCTTTGAAACTGATCCAAGGCCTACACATACTGTTTGA 1506 0.4382 MVNAMTKGGGVEDNSNFNKYACACAIVASMISIIFGYDTGVMSGAMIFIKEDLKINDTQVEVLAGILNLCALVGTLTAGKTSDYIGRRYSIVLASILFLLGSLLMGYGPNYTVLMAGRCTAGIGVGFALLVAPVYSAEISSASSRGFLTSLPELCLGIGILLGYISNYLFGKSLPLKLGWRFMLGIAAIPSLVLALGILKMPESPRWLVMRGKLGEAKNVLLQISNTPEEAELRFNDIKVAAGIYDEACQNAVVKRESVWKELILRPSHCVRWMLVTAVGIHFFEHATGIEAVMLYSPRIFKQAGVISKDKLLLAVIGIGVTKVVCLIIATVLLDRAGRRRLLLISLGGMICALSVLGFSLTMADHSAEKLVWALALSIASTYITVGFFNIGLGPVTWVYSSEIFPLRLRAQGASIGVAVNRVVNASVSMSFISINKTITIGGTFFMFAAISALAWAFFFFFLPETKGKSLEEMEKLFTKNKNNNCKAVPFETDPRPTHTV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1954 501 TIGRFAM SP: MFS transporter, sugar porter (SP) family 15 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi12g1954 501 FunFam probable polyol transporter 4 14 481 - -
Mibi12g1954 501 PRINTS Sugar transporter signature 32 42 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi12g1954 501 PRINTS Sugar transporter signature 402 414 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi12g1954 501 PRINTS Sugar transporter signature 115 134 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi12g1954 501 PRINTS Sugar transporter signature 285 295 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi12g1954 501 PRINTS Sugar transporter signature 379 400 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi12g1954 501 SUPERFAMILY MFS general substrate transporter 17 476 IPR036259 -
Mibi12g1954 501 ProSitePatterns Sugar transport proteins signature 1. 78 95 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mibi12g1954 501 Gene3D MFS general substrate transporter like domains 13 482 IPR036259 -
Mibi12g1954 501 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 482 IPR045262 GO:0015144
Mibi12g1954 501 Pfam Sugar (and other) transporter 24 478 IPR005828 GO:0016020|GO:0022857|GO:0055085
Mibi12g1954 501 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 467 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1954 Mibi-ChrMibi12 35815305 35816928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1954 12 484 Organic Solute Cotransporters AT4G36670 67.708 0.0 674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0069 10 1067817 1069848 Mibi12g1954 12 35815305 35816928 ECH
Mibi12g1954 12 35815305 35816928 Mibi12g1954 12 35815305 35816928 ECH