Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1643 ATGGACTCACAACAGAGCAATCTATTCGACACCGCTTCGCAACCCGACACTGCAAACGACGCTTACACCTTCCTCGAATTCAACACTCAAGGCGAAGATTTCGACTACCCCGAGTTTCGTGACTCGATTAGGTCCCCATCGGCTTGGCCCACTCCGTCCGATTCGCTGGTTGACCCATTGGATCGTGGTGGAGCGGTTTCTGATCACCAGTCTGATGCCTCGCCTGTTTCAGCTGCTCCTGGGAGCGTTACTAAGAATCGGGCTACGGGGTCGAGTAGTGGTGGGAATAGCCAGATGGTTGATGCATTGGCTGCTGGGATGAGCGGGTTGAATTTTGAGGATACTGGTGATGATGATAATTATGAATTTGGTAAAGGGGATTTCACTGAGCATGCTTGCAGATATTGTGGGGTGTCGAACCCTGCGTGTGTTGTGAGGTGTAATGTGCCTTCTTGTCGCAAATGGTTTTGTAACTCACGGGGGAACACGTCGGGTTCACATATCGTTAATCACCTGGTTCGAGCAAAACACAAGGAAGTCTGTCTTCACAAAGATAGTCCTTTGGGAGAAACTATTCTTGAATGCTACAACTGTGGGTGCCGTAATGTGTTTCTCCTTGGATTTATTTCTGCCAAGACGGAAAGTGTAGTTGTTCTTCTATGTCGTGAACCTTGCTTGAGTGTTAATGCCTTGAAAGATATGAATTGGGATCTTAGTCAATGGTGCCCCTTGATTGATGATAGGTGTTTCCTGCAGTGGCTTGTAAAGATTCCATCCGAACAGGAGCAGTTGAGAGCGCGGCAGATAAGTGCTCAGCAAATTAATAAGGTGGAAGAGCTTTGGAAAACTAATCCTGATGCTTCTCTTGAGGACCTTGAGAAACCTGGTGTAGATGATGAGCCTCAGCCTGTGGCTATAAAATATGAAGATGCATATCAGTATCAAAATGTTTTTGCACCACTCATTAAGCTTGAAGCTGATTATGATAAGATGATGAAAGAGTCTCAAAGCAAGGACAATGTTACCATTCGGTGGGATATTGGTCTTAATAAAAAACGCATTGCATACTTTGTATTTCCAAAGGAAGATAATGAGTTGCGTCTTGTACCTGGTGATGAGTTACGGCTGCGATATTCTGGGGATGCTGCACATCCAGCATGGCAATCAGTGGGGCATGTGATTAAGCTAACTGCACAAGAGGAAGTTGCTCTTGAGCTTCGTGCAAATCAGGGGGTTCCAGTTGATATAAACCATGGTTTCAGTGTTGATTTTGTCTGGAAGAGTACAAGCTTTGATAGGATGCAAGGGGCTATGAAAACCTTTGCAGTGGATGAGACTAGTGTAAGCGGGTATATTTATCATCACTTATTGGGTCATGAAGTTGAGGTTCAGATGGTGCGCAATGCTTTGCCTCGTCGCTTTGGCGCGCCTGGGCTTCCAGAGCTCAATGCATCTCAAGTTTTTGCAGTTAAAAGTGTTCTTCAGAGGCCTATTAGTTTGATTCAAGGTCCTCCTGGAACTGGCAAGACTGTAACTTCTGCAGCAATTGTATATCACATGGCAAAACAAGGTCAGGGGCAGGTTTTGGTTTGTGCACCTAGCAACGTGGCTGTTGATCAGCTTGCTGAAAAGATTAGTTCTACTGGGCTGAAGGTTGTTAGGCTCTGTGCTAAGTCAAGAGAAGCTGTGAGTTCTCCAGTCGAGCACTTAACACTTCATTATCAGGTTCGAAATCTTGACACATCTGACAAGAGTGAACTCCACAAGCTACAGCAGCTGAAAGACGAACAAGGTGAACTTTCCAGTAGTGACGAGAAAAAGTACAAAGCATTAAAGCGAGCAACAGAGAGGGAGATTTCTCAGAGTGCCGATGTTATCTGCTGCACGTGTGTTGGTGCTGGAGATCCTCGGCTGGCAAATTTTAGGTTCCGTCAGGTACTCATTGATGAGTCTACTCAAGCAACAGAACCAGAATGTCTCATTCCTTTGGTGCTTGGGGTTAAGCAGGTTGTTCTTGTTGGTGATCATTGTCAGCTGGGTCCAGTCATTATGTGCAAGAAGGCAGCTCGAGCAGGCCTTGCACAGTCACTTTTTGAACGACTTGTTCTGCTTGGTGTTAAACCAATAAGGTTGCAGGTTCAATACCGTATGCATCCATGTCTGTCAGAATTCCCTTCAAATAGCTTTTATGAAGGCACTCTGCAAAATGGAGTTACTGTTAATGAAAGGCAATTATCAGGAATTGATTTTCCCTGGCCAGTACCCAATCGTCCCATGTTTTTTTATGTTCAGATGGGACAAGAAGAAATAAGTGCTAGCGGCACATCTTATTTGAATAGAACCGAGGCTGCAAATGTTGAAAAGATTGTAACTACTTTCTTAAGAAGTGGTGTAGTTCCTAATCAGATTGGTGTGATAACACCTTACGAGGGACAACGAGCTTATATTGTGAACTATATGTCAAGAAATGGTGCCCTCCGGCAACAACTTTACAAGGAGATTGAGGTTGCTAGTGTTGATTCCTTTCAAGGAAGGGAGAAAGACTACATCATACTGTCATGTGTAAGAAGTAATGAGCATCAGGGCATTGGGTTTCTGAATGATCCCCGTAGGCTCAATGTTGCTTTGACCAGAGCTAGGTATGGTATTGTTATTCTGGGAAACCCTAAAGTTCTTAGCAAGCAGCCTCTGTGGAATAGCTTGCTGACGCACTACAAGGAACACGAGTGTCTGGTTGAAGGGCCTTTAAATAATTTGAAGCAGAGTATGGTTCAGTTCCAGAAACCCAAGAAGATCTACAATGATAGAAGGCTATTTTATGGTGGTGGTCCTGGAGTTGCGGCCAGTGATAATTTTGGTTCAGTTGGATCTGGCACAACTTCTGATCGGAAGAGTGGCAGGGGCAGGGGATCTTACATGCCTCCTGGCCCATCAAATGGAACCCATAAGCCTGGTGTGCATCCATCTGGGTATCCCATTCCAAGGGTACCTATGCCACCTTTTGGTGGTCCCCAATCTCAACCATATGCCATTCCCTCTCGTGGAGCTGTACATGGGCCTGTTGGGGCAGTCCCTCATGTACCACCTCCAGGCAGTCGTGGTTTTGGTGCTGGACGAGGTAATTCTGGCACCACCGTTGGCAATCATCTCCCACACCAGCAAGGCACACAGCAGTCTCTGGGGAATCTTGGTTCAACTTTCAACTTTCCAGCTCTGGAAAATCCCAACAGCCAGCCGTCTGTTGGTGTTCCATTGTCTCAACCTGGGTTTGCAAATAATATGCCAGGACAAGGATCAAGCCAGTCATTTAGAGATCAGTTTTCTGTGCCAGGAATGTCTCAGGACTTCTTGGGTGATGATTTCAAAAGCCAGGGATCTCATGTTCCTTATAATGTTACTGATTTCTCTACTCAGGCTTCTCAGAGTGGGTATGCTGTTGATTATGTTACACAAGGAGCACAAGGTGGATTCCCTGGAAACTTTATGAACCAGAATTCTCAAGCTGGTTACTCACGTTTTGGTTCTGGAAATGATTTTATGTCTCAGGACTATATGACCCATGGATCACAAGGTCTTTTCACTCAGGTTGGCTTCAACGATCCCTTGCAAGATGATGCACCACAGAGCCAATTTGGTGTGGGCAATGCCAACCCTCTCCAGTCTCAGGGCTTGATGAATTCGCTCTACTCCCAACCTTTTGCTCACTACAACACGCAGCCGATGAACATGCAGGCCTCCCAGCCACAGCCTCAGGGTCAGAGCTCCCAAAATCAGAAAATACATTATAATGGTTGA 3795 0.4569 MDSQQSNLFDTASQPDTANDAYTFLEFNTQGEDFDYPEFRDSIRSPSAWPTPSDSLVDPLDRGGAVSDHQSDASPVSAAPGSVTKNRATGSSSGGNSQMVDALAAGMSGLNFEDTGDDDNYEFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQPVAIKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRANQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRNLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQLSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPNQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFYGGGPGVAASDNFGSVGSGTTSDRKSGRGRGSYMPPGPSNGTHKPGVHPSGYPIPRVPMPPFGGPQSQPYAIPSRGAVHGPVGAVPHVPPPGSRGFGAGRGNSGTTVGNHLPHQQGTQQSLGNLGSTFNFPALENPNSQPSVGVPLSQPGFANNMPGQGSSQSFRDQFSVPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQSGYAVDYVTQGAQGGFPGNFMNQNSQAGYSRFGSGNDFMSQDYMTHGSQGLFTQVGFNDPLQDDAPQSQFGVGNANPLQSQGLMNSLYSQPFAHYNTQPMNMQASQPQPQGQSSQNQKIHYNG 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1643 1264 Gene3D - 716 927 IPR027417 -
Mibi12g1643 1264 MobiDBLite consensus disorder prediction 1 99 - -
Mibi12g1643 1264 Gene3D - 337 425 - -
Mibi12g1643 1264 PANTHER DNA2/NAM7 HELICASE FAMILY 235 994 IPR045055 -
Mibi12g1643 1264 FunFam regulator of nonsense transcripts 1 homolog 337 425 - -
Mibi12g1643 1264 MobiDBLite consensus disorder prediction 70 99 - -
Mibi12g1643 1264 Pfam AAA domain 580 684 IPR041677 GO:0004386
Mibi12g1643 1264 CDD 1B_UPF1-like 337 424 IPR040812 -
Mibi12g1643 1264 Gene3D - 567 619 - -
Mibi12g1643 1264 MobiDBLite consensus disorder prediction 950 992 - -
Mibi12g1643 1264 MobiDBLite consensus disorder prediction 1235 1264 - -
Mibi12g1643 1264 CDD DEXXQc_UPF1 481 716 - -
Mibi12g1643 1264 MobiDBLite consensus disorder prediction 952 966 - -
Mibi12g1643 1264 Pfam AAA domain 694 889 IPR041679 -
Mibi12g1643 1264 Pfam RNA helicase (UPF2 interacting domain) 131 284 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Mibi12g1643 1264 CDD SF1_C_Upf1 717 906 IPR041679 -
Mibi12g1643 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 478 912 IPR027417 -
Mibi12g1643 1264 Pfam Type III restriction enzyme, res subunit 487 551 IPR006935 GO:0003677|GO:0005524|GO:0016787
Mibi12g1643 1264 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 490 622 IPR014001 -
Mibi12g1643 1264 CDD ZBD_UPF1-like 132 254 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Mibi12g1643 1264 FunFam Regulator of nonsense transcripts 1 716 927 - -
Mibi12g1643 1264 Gene3D - 445 715 IPR027417 -
Mibi12g1643 1264 Pfam RNA helicase UPF1, 1B domain 336 425 IPR040812 -
Mibi12g1643 1264 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1643 Mibi-ChrMibi12 32462397 32473477 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1643 12 32462397 32473477 Mibi12g1643 12 32462397 32473477 ECH