Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1425 ATGGATTCGTCGGCAAAAACCATACTCGTCTCCGGTGGGGCCGGTTTCATCGGCTCCCACACCGTTGTTCAGCTTCTCAAAGGTGACTTTAACGTTACTATCTTCGATAACCTTGACAATTCCGCCATGGAAGCCATCAATCGTGTTCGAGATTTGGTGGGCCCTGACTTTTCTAAGAACCTAGACTTTGTTCAAGGTGATCTCAGGAATAAAGATGACTTGGATAATCTGTTTTCTACCACCAAATTTGATGCGGTGATCCATTTTGCGGGGCTAAAAGCTGTCGGAGAAAGTGTTAAAGATCCCCTCCGATATTTTGAATATAATTTAATCGGCACCATCAATCTCTATCAAATCATGAAAAAGTACAACTGTAAGAAGATGGTATTCTCATCATCTGCAACGGTGTATGGGGAACCTAAGAAGATACCTTGTGATGAGAATTCAGAGTTAATGGCCATGAGTCCATATGGAAGGACCAAGCTGATGCTAGAAGACATAGCTAGAGACCTTCAAAAAGCAGAGGCAGATTGGGGGATAATATTACTGAGATACTTCAATCCGGTAGGAGCACATGAGAGTGGAAAAATTGGTGAAGATCCAAGAGGAATCCCTAATAACCTCATGCCTTTCATACAGCAAGTTGCTGTTGGAAGATTGCCTGAACTCAACCTATTTGGTGTTGATTACCCCACAAAAGATGGCACTGCGGTAAGGGACTATATCCATGTAATGGATTTGGCAGATGGTCACATCGCTGCCCTGCTCAAGCTTTTCAACACGGACGATATAGGTTGTACGGCTTACAATCTAGGAACTGGTCGTGGGACGTCTGTGCTTGAAATGGTTGCAGCGTTTGAAAAAGCTTCCGGAAAGAAAATTCCGCTGAAGGTGTGTCCAAGGAGGGAAGGAGATGCTGTTGCTGTATATGCATCTACAGAGAAAGCTGAGAGAGAACTAGGGTGGAAGGCAAAATATGGGATAGAGGAAATGTGCAGGGACCAATGGTGTTGGGCAAGTAACAACCCTTGGGGATACCAGGGGAAACCATAA 1053 0.4444 MDSSAKTILVSGGAGFIGSHTVVQLLKGDFNVTIFDNLDNSAMEAINRVRDLVGPDFSKNLDFVQGDLRNKDDLDNLFSTTKFDAVIHFAGLKAVGESVKDPLRYFEYNLIGTINLYQIMKKYNCKKMVFSSSATVYGEPKKIPCDENSELMAMSPYGRTKLMLEDIARDLQKAEADWGIILLRYFNPVGAHESGKIGEDPRGIPNNLMPFIQQVAVGRLPELNLFGVDYPTKDGTAVRDYIHVMDLADGHIAALLKLFNTDDIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPLKVCPRREGDAVAVYASTEKAERELGWKAKYGIEEMCRDQWCWASNNPWGYQGKP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1425 350 CDD UDP_G4E_1_SDR_e 7 338 IPR005886 GO:0003978|GO:0006012
Mibi12g1425 350 TIGRFAM galE: UDP-glucose 4-epimerase GalE 8 343 IPR005886 GO:0003978|GO:0006012
Mibi12g1425 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 347 - -
Mibi12g1425 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 347 IPR036291 -
Mibi12g1425 350 Gene3D - 197 339 - -
Mibi12g1425 350 Pfam GDP-mannose 4,6 dehydratase 9 334 IPR016040 -
Mibi12g1425 350 FunFam UDP-glucose 4-epimerase 4 282 350 - -
Mibi12g1425 350 PRINTS Nucleotide sugar epimerase signature 266 281 - -
Mibi12g1425 350 PRINTS Nucleotide sugar epimerase signature 239 254 - -
Mibi12g1425 350 PRINTS Nucleotide sugar epimerase signature 305 322 - -
Mibi12g1425 350 Gene3D - 8 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1425 Mibi-ChrMibi12 29843032 29845602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1425 7 333 Miscellaneous Gene Families AT4G00110 26.724 1.07e-22 96.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1425 12 29843032 29845602 Mibi12g1425 12 29843032 29845602 ECH