Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1424 ATGGCACACATCAAAAGCTTTCCTATCTTCTCCCTCCTTCTTGCTCTTGCCTTCTCTTTCACCAACGCCGCCAGGTTTGATGTCACCAACAAGTGCTCCTACACGGTGTGGGCGGCGGCCGTGCCAGGTGGCGGCAGGCAGTTAAACTCCGGCGAGACATGGAGCATCGACGTGGCGGCCGGCACCACCGGGGCCCGCATATGGGCCCGAACCAACTGCAACTTCGACGGGTCGGGTCGGGGGCAATGTCAAACCGGTGATTGTGGAGGTTTACTCCAATGCCAAGCCTATGGAACACCACCAAACACACTTGCAGAATTTGCACTCAACCAATACAACAATATGGATTTCTATGATATTTCATTGGTGGATGGATTCAATGTTCCCATGGAGTTTAGTCCCACATCAAATGGGTGCACACGTGCCATCCAATGTACCGCAGACATCATTGGACAGTGTCCTGACCAGCTGAAAACTCAAGGTGGCTGCAATAATCCATGCACTGTGTTTAAGACTGATCAGTATTGTTGTAACTCTGGAAGCTGTCAGCCCACTGATTATTCTAAGTTCTTTAAGGATAGGTGCCCTGATGCTTATAGTTACCCTAAGGATGATGCTACCAGCACTTTCACTTGCCCAGGTGGAACCAATTATAGGGTTGTTTTTTGCCCTTGA 675 0.5007 MAHIKSFPIFSLLLALAFSFTNAARFDVTNKCSYTVWAAAVPGGGRQLNSGETWSIDVAAGTTGARIWARTNCNFDGSGRGQCQTGDCGGLLQCQAYGTPPNTLAEFALNQYNNMDFYDISLVDGFNVPMEFSPTSNGCTRAIQCTADIIGQCPDQLKTQGGCNNPCTVFKTDQYCCNSGSCQPTDYSKFFKDRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1424 224 PIRSF PR5 1 224 IPR001938 -
Mibi12g1424 224 Gene3D Thaumatin 24 224 IPR037176 -
Mibi12g1424 224 ProSiteProfiles Thaumatin family profile. 23 224 IPR001938 -
Mibi12g1424 224 PRINTS Pathogenesis-related protein signature 116 132 IPR001938 -
Mibi12g1424 224 PRINTS Pathogenesis-related protein signature 214 223 IPR001938 -
Mibi12g1424 224 PRINTS Pathogenesis-related protein signature 44 53 IPR001938 -
Mibi12g1424 224 PRINTS Pathogenesis-related protein signature 79 108 IPR001938 -
Mibi12g1424 224 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Mibi12g1424 224 PRINTS Pathogenesis-related protein signature 66 77 IPR001938 -
Mibi12g1424 224 SMART tha2 26 224 IPR001938 -
Mibi12g1424 224 SUPERFAMILY Osmotin, thaumatin-like protein 24 224 IPR037176 -
Mibi12g1424 224 PANTHER OS03G0233200 PROTEIN 12 224 IPR001938 -
Mibi12g1424 224 FunFam Thaumatin I 24 224 - -
Mibi12g1424 224 ProSitePatterns Thaumatin family signature. 79 94 IPR017949 -
Mibi12g1424 224 CDD TLP-P 26 224 - -
Mibi12g1424 224 Pfam Thaumatin family 30 224 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1424 Mibi-ChrMibi12 29836676 29837350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1424 4 224 Receptor kinase-like Gene Family AT5G38280 35.200 7.23e-45 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1424 12 29836676 29837350 Mibi12g1424 12 29836676 29837350 ECH