LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi12g1421	ATGGTATTTTCAGGTAGCTCGTTTTCCAGTAGAGAGGATAAATCATCAGAGATTATTGAAAGGAGGAAGAAATTTCAAAGCCTTATAGCTTCCACAAACTTTGAAACAGCAGAAGTTTTACTCTTACGTGACATCACCTGTTGCCTTAAAATGGGAAGAAATGGCCTTGAAAAGTTTGAGGCAACCAACAGATTGTTCAGAAAGAACACTATTAGTGATTCTTCACAAGTTTTAAAGAAAGGAAATGAACATCCTGCATGGTTACCTGATGGCTGGAACGTGGGTTTCAAAACCCGAAAAAGTGGTGTACACAAGGGAGCTAGATATAAGTGCTTCATTGATCCATTGAATAGATTCAAATTCTACTCCAAACCTGAGGTATTACGGTATCTTGAAACTGTAGATGGCAGCAACTGCACTTTCAAGAAGGGATGCACTGCTGAGCAATCTACAAACAATCTGTCATCTGCTGCCAAAAGACAGAAACTGAAGCATTCTGCAGTCAAACAGCAGCATTTTGCCGGCAAAGAAGTTTCTGACAGTGTCTTAGAATTGTCAGGTGCCTACAGCCCAAAAGAAGGGCAAACTATCAAGGTGTCTGCTGAATTTAAGGTTTCTCCTGTTTTGACATCTGACTCTGTGGTCAAGATGCATTTGCCCAAGGATTCAGCTGATAACAATTCTGAAGTTAAACAATCTGATCCAGCTGATGTGCAAGAGAAGAATTATTTTACGAGTGGAGTGGAGAAGGCTGATGAAGAGAACCCTGTTCTCACAAGCATGTCCAAAATTGAGAAAGAATTGAATGTGCCTCACCAGAATTTGAGACAACTCACTGGAAAAGCTGACCAGTTAACCAGCATTGTGACCCATGAACCGGTTCGTCAAGTTTCAAAGAGAAACTGTAGGAAAAATCCTAAAGATGTTGACTTGAAAACTAAACCATCTCAAAAGCTGAATGTTGTACCAGAAATTCAGTGTGCACTAAAAACATGTGGGGAGTTACTGAACGAAAACAGCAATGCTGAAGTTGAGCCGGTTTATAGAGATCAACCATACCAGCAAGTAAAAGAGAAAATAGATGACCAAGAGGTAGAACTTAAGTATTCTCAGTCTCAGGATTTCTGTGCACAAAGCCTCAAGGTTGAAATGAAGAACATCACATGTGAATTACCGGGTAAGGATGTTTTTAATAGGGATGAAAGCTTGCCTTCTGAAACTAATGTCTTGAAAGATGTCAAATTGCCTGTCAATCAGATTGGAAAAACTGATGCCTCTGATATTCATGTTAACTTGAACAAATCTAATAAGAAGAAAGATCATCGCAACCCATGTCAGCGGGCTTCAAAGCGACTTGCTGGATTAGAACCTGAGGTGATGACCAACTCCATAGTCTGCAAAAGAGCTCCTGAATACAAGAGCAGAAGGTCTAAAGGTAAGGTCAATGCAGTATTGCAGCAAACTGAGGGTGGGCTAGCTGTTGATCTTGCTGATAATGCTTCTACCTATATAAAGATGCCATTAAATGGAGAGATATCAGATAAAAAACTCTTATCTCCTAAAGTTTCGCCCATTACCCATGAGCAACCAGTAAAGTATGGAAATGAAGGAATAGATTATGAGAAATCAGAACCTCAGCCATCCATCACGTCCCAATATTCTCAGTCTGACCCATGCTTGGAATTTGCAATCAAGACTCTCACTGGTGTGTTACCCATTGAGGATTCTATTGATAAGAAGCCTAATCCAGCTGATGAAGCTATGTTATTTGACAGTTCTAAAGAAAGCAGCAGTGACAGAAATGTGCAGGTAAGTTCAAAAAAAATGAAGAGAAAGAAAAAGCTTTCATTGCCTCACCGGTTGTCAAGGAGACTTGCAGGCCATGAGCCTGAGGTGATGCCTGCTTTAAGAGCTCTAGAATATGCAACTAGGAAATCATGCAAAGATAAATCAACTGCAACTGTGGCTATGAACAATGAAGTTTCTAACTTAGCTAGTGCTGGCAAAGAAACAGAGCTTCTTGTTGATACATCTGACAGTTTGTTGAAATCAAATATGCTTGGTGAACCATCTAAGAAGAGTGAAAAGCCATACGAAGTCCAAAATTTTCCCAACTATCAACAGCAGAAGCTGGAATCTGATAGAATTGGTGACAAGAGTTTGGAGACAGAGGCATGCTTACTGTTTGGGATGGACATGGAGCATCCTCTTCGTGTATCTGGCAGTTTGGAAGCAAGGGTACTTGAAGAAACATCAAACAAGAGTGAGAAGCCGTATGGAACCCAACCGGTTGAAGAATTGAATGAGAGTGTGAAATTATTTGAAACCCAAACTATTCCCATGGAGCATCAGCAGGAGCTTGAATCTGTGATGGGTTCAGAAACACAGCTTTGCTTACCAGCTGAGAAAGAAACTGAATGTACACTTCATGCAGCTGGCAGTTCAGAAACAAGATTACTGAAAGATACATCGAACAAGAGTGTGAAGTCATATGAATCTTTGACTATGGAAGAATTGTTGTATGATGATAAGACTACTGCCAATGGGCAACAGCAGAAGCTTGAAGCTGAAAAACTTGGTAGCACGGTGTCTGAGTCACAAATGTGCTTAACCTACGAGCAGTTCTGCTCAGATCCATGTCTAGAATTTGCAATTAAGACCCTAACAGGTGCATTGCCAGTAGATGATGCTGCCAGCTTATTGCCAGTTATGACTCCTGTTAACAATGACCAAGCACACAAGGAATTGCTTGATGGTGCGGTAAAGAGTCCCAAAGAAGTAAGTCATGATAACTCGAACGAATCCCCAAATAATAAACTTATGATGCCTAATTTATGTTTTCAGCCTCCAAAACAAACTCCATTGAAGACCAGATCCATATTTTGCCAAAATAGGGTGTCATATAGTGATGAAGCTGATTTAACCAGGAAATTGAGTGAAGGAGAGCCCCTTTGTAGGGAAGACATAAATACGACAGAACCTGTGTGTCAACCAATAACTGGAAGCTCTGCTATCCATGAAGAGCCATCGAAGAAAATCCCTCAAGTTCTTGATGCTGAAGCTGTTCCATCTGAGCAACCGCAGCTTGAAACTGAAATCATGAGCTGTGAGAAGCATGAATCTCAGTTCCGTTATCCATTCATGGATTCTTGGTCTGACCCAAGTCTGGAATTTGCATTCAAGACTTTAACAGGTGCCATACCAATAGAGGAAGATTTGCCAATTCAGGGATGTTTGGAGGAAACTACCATGTGGAATGGCCCAAGAGACAGTTACTCGTCGTTACCGGATTTTGGATCTGCCAGTTTTTCTCAAAGTGATATATCATCCTACTACAATATGGAGGAGAGATCCATACCAGAGCAGCAGCCACACCCACAAACGAGCCTTGGCTTGGAGGTTGATCCTCAGAAATACCATTCTCATTGCAATTGGAAAATTTCAAGGTAA	3450	0.4093	MVFSGSSFSSREDKSSEIIERRKKFQSLIASTNFETAEVLLLRDITCCLKMGRNGLEKFEATNRLFRKNTISDSSQVLKKGNEHPAWLPDGWNVGFKTRKSGVHKGARYKCFIDPLNRFKFYSKPEVLRYLETVDGSNCTFKKGCTAEQSTNNLSSAAKRQKLKHSAVKQQHFAGKEVSDSVLELSGAYSPKEGQTIKVSAEFKVSPVLTSDSVVKMHLPKDSADNNSEVKQSDPADVQEKNYFTSGVEKADEENPVLTSMSKIEKELNVPHQNLRQLTGKADQLTSIVTHEPVRQVSKRNCRKNPKDVDLKTKPSQKLNVVPEIQCALKTCGELLNENSNAEVEPVYRDQPYQQVKEKIDDQEVELKYSQSQDFCAQSLKVEMKNITCELPGKDVFNRDESLPSETNVLKDVKLPVNQIGKTDASDIHVNLNKSNKKKDHRNPCQRASKRLAGLEPEVMTNSIVCKRAPEYKSRRSKGKVNAVLQQTEGGLAVDLADNASTYIKMPLNGEISDKKLLSPKVSPITHEQPVKYGNEGIDYEKSEPQPSITSQYSQSDPCLEFAIKTLTGVLPIEDSIDKKPNPADEAMLFDSSKESSSDRNVQVSSKKMKRKKKLSLPHRLSRRLAGHEPEVMPALRALEYATRKSCKDKSTATVAMNNEVSNLASAGKETELLVDTSDSLLKSNMLGEPSKKSEKPYEVQNFPNYQQQKLESDRIGDKSLETEACLLFGMDMEHPLRVSGSLEARVLEETSNKSEKPYGTQPVEELNESVKLFETQTIPMEHQQELESVMGSETQLCLPAEKETECTLHAAGSSETRLLKDTSNKSVKSYESLTMEELLYDDKTTANGQQQKLEAEKLGSTVSESQMCLTYEQFCSDPCLEFAIKTLTGALPVDDAASLLPVMTPVNNDQAHKELLDGAVKSPKEVSHDNSNESPNNKLMMPNLCFQPPKQTPLKTRSIFCQNRVSYSDEADLTRKLSEGEPLCREDINTTEPVCQPITGSSAIHEEPSKKIPQVLDAEAVPSEQPQLETEIMSCEKHESQFRYPFMDSWSDPSLEFAFKTLTGAIPIEEDLPIQGCLEETTMWNGPRDSYSSLPDFGSASFSQSDISSYYNMEERSIPEQQPHPQTSLGLEVDPQKYHSHCNWKISR	1149

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi12g1421	1149	MobiDBLite	consensus disorder prediction	923	942	-	-
	Mibi12g1421	1149	MobiDBLite	consensus disorder prediction	527	553	-	-
	Mibi12g1421	1149	Pfam	Methyl-CpG binding domain	84	134	IPR001739	GO:0003677
	Mibi12g1421	1149	Gene3D	-	58	177	-	-
	Mibi12g1421	1149	PANTHER	OS04G0193200 PROTEIN	55	155	IPR038945	-
	Mibi12g1421	1149	Coils	Coil	353	373	-	-
	Mibi12g1421	1149	MobiDBLite	consensus disorder prediction	575	618	-	-
	Mibi12g1421	1149	SUPERFAMILY	DNA-binding domain	83	139	IPR016177	GO:0003677
	Mibi12g1421	1149	ProSiteProfiles	Methyl-CpG-binding domain (MBD) profile.	78	146	IPR001739	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi12g1421	Mibi-ChrMibi12	29824751	29829466	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi12g1421	12	29824751	29829466	Mibi12g1421	12	29824751	29829466	ECH