Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1390 ATGTGGATATTTAGTTGGAAGGGGCCATCTGGATTCTCAGCCAATTCCACTGCGGAGCAAGTTACTGAAGGAATCGATGGAAATGGTCTCACTGCCATCGTCACAGGGGCATCAAGTGGACTTGGTCTTGAAACCACCCGAGTTCTAGCATTACGTGGTGTCCATGTGGTTATGGCAGTAAGGAATGTGGACTCTGGTATGAGCGTCAAAGACAAAATAGTTGAGGAAGTCCCCTCTGCTAAGATTGATGTGATGAAGTTAGATCTTAGCTCAATGGCATCAGTAAGGAAATTTGCTGCAGATTACAGTTCCTCTGGTCTGCCTCTCAATATCCTAATTAATAATGCAGGGATTATGGCTGCTCCGTTCACACTTTCACCAGACAACATTGAGTTGCAGTTTGCAACCAATCATTTAGGCCATTTTCTCTTGACAAACCTTTTGTTGGAAACTATGAAGAAAACGGTGCACGAATGCAAGCGTGGGGGAAGAATAGTTATTGTATCATCTGAGGCTCACAGGTTTTCATATAATGAAGGGATTCGTTTTGATAAAATCAATGATGAATCAGGATACCACAGTTATCAGGCTTATGGACAATCAAAGCTTGCTAATATTTTGCATGCAAAAGAGCTTGCAAGACGCTTAAAGGAAGGAGGAGTTGAAATAACTGCTAACTCCCTTCATCCAGGGACAATTATAACAAATATTCTTCGGTACCATGGTTTCATTAATGCCGTTGCTAATGCAGTGGGAAAGTTCTTCCTTAAAAATGAGCAGCAGGGAGCTGCAACTCAATGTTATGTGGCATTACATCCACAAGTTAAGGGAATATCTGGTGAATATTTTATGGATAGCAACAAGGCAAAACCAAATTCTTTAGCTACAGATTCAGAATTGGCCAGAAAACTCTGGGATTTCAGCTTGAGCCTGACAGATCCAGAGTAG 948 0.4177 MWIFSWKGPSGFSANSTAEQVTEGIDGNGLTAIVTGASSGLGLETTRVLALRGVHVVMAVRNVDSGMSVKDKIVEEVPSAKIDVMKLDLSSMASVRKFAADYSSSGLPLNILINNAGIMAAPFTLSPDNIELQFATNHLGHFLLTNLLLETMKKTVHECKRGGRIVIVSSEAHRFSYNEGIRFDKINDESGYHSYQAYGQSKLANILHAKELARRLKEGGVEITANSLHPGTIITNILRYHGFINAVANAVGKFFLKNEQQGAATQCYVALHPQVKGISGEYFMDSNKAKPNSLATDSELARKLWDFSLSLTDPE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1390 315 Pfam short chain dehydrogenase 31 177 IPR002347 -
Mibi12g1390 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Mibi12g1390 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Mibi12g1390 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Mibi12g1390 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Mibi12g1390 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Mibi12g1390 315 PANTHER RETINOL DEHYDROGENASE 9 312 - -
Mibi12g1390 315 CDD retinol-DH_like_SDR_c_like 29 305 - -
Mibi12g1390 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 287 IPR036291 -
Mibi12g1390 315 Gene3D - 23 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1390 Mibi-ChrMibi12 29560611 29563936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1390 33 291 Acyl Lipid Metabolism Gene Families AT3G55290 28.148 1.86e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1390 12 29560611 29563936 Mibi12g1390 12 29560611 29563936 ECH