Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1375 ATGGGACACGCACACGGCGACAAAGGCCGACCATTCAAGAAGTTGAAGGCCGCTAAATTTGAAGATTCCCGAAAAGGGTTCGTCGACGATGACGATGTGTATATGGGTGATGATGGTTATGATGACGACGGTGAGAAAGACGGGAAGGCCAAAGATTTTAGCAAACTAGAGCTGAAAAAGGATCATCCGAATCGACCACTTTGGGCTTGTGGCAATGGTCGGATATTTCTCGAGACCTTTTCTCCCTTGTACAAACAAGCTTACGATTTCCTTATTGCCATAGCGGAACCTGTTTGCAGGCCGGAGTCTATGCACGAATACAACCTTACTCCCCATTCCTTGTATGCTGCGGTTTCAGTTGGTCTCGAAACTGAAACAATCATATCGGTTTTGAACAAGTTATCCAAGACCATGCTTCCTAAAGAGATGATCAAGTTTATTCAGGATTCAACTGCAAATTATGGCAAAGTAAAGCTTGTACTTAAGAAAAATCGATACTTTATTGAATCTCCATTTCCAGAGGTGTTGAAGACACTGCTAAGAGATGAAGTTATATCTCGATCAAGGATCACTTCTGAGGGCACAGCTGGAGATGGATTTACAATTAGCAAAACAGCAGGTGAAATTGAAGGCAGTCACGGTGAGTTGCTGAATGAAGCAGAAGTAGCTGCAGCTGCAGAAGAGAAAGAAACTCATTCATTTGAAATTGACCCTTCTCAGGTTGAAAATGTAAAGCAACGATGCTTGCCGAATGCCTTGAATTATCCCATGTTAGAGGAGTATGACTTTAGAAATGATACAGTCAACCCTGATCTGGATATGGAGTTAAAGCCTCAAGCACAGCCACGGCCATATCAAGAGAAGAGCTTGAGTAAAATGTTTGGAAATGGTAGAGCAAGATCTGGTATCATAGTTCTACCTTGTGGTGCTGGTAAATCTCTTGTTGGTGTTTCTGCAGCCTGCCGTATAAAAAAGAGCTGCCTTTGTTTGGCAACCAATGCTGTGTCTGTGGACCAGTGGGCTTTCCAGTTTAAGCTATGGTCAACTATCCGAGATGAAAATATCTGTCGTTTCACATCTGATAGCAAAGAGAGGTTCCGTGGTAATGCTGGAGTGGTTGTGACGACATATAATATGGTTGCTTTTGGTGGCAAACGTTCTGAAGAATCTGAGAAGATCATTGAAGAAATTAGAAATAGAGAATGGGGATTGCTTCTCATGGATGAGGTACATGTGGTTCCTGCACATATGTTTCGGAAGGTCATTAGCCTCACTAAATCTCACTGCAAACTCGGGCTCACAGCTACACTTGTGAGAGAGGATGAAAGGATTACAGATCTGAATTTTCTCATTGGTCCCAAGTTGTATGAAGCAAATTGGTTGGATCTTGTGAAAGGTGGATTTATTGCAAATGTACAGTGTGCTGAAGTGTGGTGTCCAATGACAAAAGAATTTTTTGCGGAGTATCTGAAGAAAGAGAATTCCAAGAAGAGGCAGGCACTCTATGTGATGAATCCAAATAAGTTCAGAGCATGCGAGTTTCTCATAAAGTACCATGAAACACAGCGTGGTGATAAAATTATAGTCTTTGCTGATAATCTTTTTGCTCTAACTGAATATGCCATGAAACTTCGCAAACCAATGATATATGGTGCTACAAGCCATGTTGAGAGGACAAAAATTCTACAAGCATTCAAAACTAGCAAAGATGTCAACACAATATTCCTTTCCAAGGTGGGTGATAACTCAATTGATATTCCAGAAGCGAATGTGATAATTCAGATCTCTTCACATGCTGGTTCAAGGCGTCAAGAAGCTCAACGTCTAGGCCGTATTCTTAGGGCAAAGGGCAAGCTTCAGGACAGGATGGCAGGTGGTAAGGAGGAGTATAATGCATTTTTTTATTCTCTCGTCTCAACAGATACCCAGGAGATGTACTACTCAACCAAGAGGCAGCAGTTTTTAATTGATCAGGGTTATAGCTTTAAGGTAATTACAAGCCTACCTCCAGCTGGAGAAGAAGCTTCATTGAGTTATTATCATATGGAAGATCAATTGGCACTTCTTGGAAAGGTCTTGAGCGCCGGTGATGATGCTGTTGGTCTAGAGCAACTCGAAGAAGATGCAGATGAAATAGCTCTAAACAACGCCCGGCGTTCGACAGGATCCATGAGCGCCATGTCAGGTGCAAAGGGAATGGTTTACATGGAGTACAGTACTGGGCGCAATAAAGGTCAAGCGCAGATCAAGAGCAAGCCAAAAGATCCAGCTAAGCGGCACTTCTTATTTAAAAGACGCTATGGCTCATAG 2310 0.4247 MGHAHGDKGRPFKKLKAAKFEDSRKGFVDDDDVYMGDDGYDDDGEKDGKAKDFSKLELKKDHPNRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTMLPKEMIKFIQDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDEVISRSRITSEGTAGDGFTISKTAGEIEGSHGELLNEAEVAAAAEEKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDENICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIKYHETQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPAGEEASLSYYHMEDQLALLGKVLSAGDDAVGLEQLEEDADEIALNNARRSTGSMSAMSGAKGMVYMEYSTGRNKGQAQIKSKPKDPAKRHFLFKRRYGS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1375 769 CDD SF2_C_XPB 474 638 - -
Mibi12g1375 769 Pfam ERCC3/RAD25/XPB C-terminal helicase 463 711 IPR032438 -
Mibi12g1375 769 FunFam Putative DNA repair helicase rad25 464 706 - -
Mibi12g1375 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 714 IPR027417 -
Mibi12g1375 769 Pfam Type III restriction enzyme, res subunit 281 437 IPR006935 GO:0003677|GO:0005524|GO:0016787
Mibi12g1375 769 SMART ultradead3 278 459 IPR014001 -
Mibi12g1375 769 Gene3D - 272 463 IPR027417 -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 263 289 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 401 421 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 467 489 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 628 651 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 525 547 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 151 170 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 572 590 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 505 520 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 65 85 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 294 316 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 591 616 - -
Mibi12g1375 769 PRINTS Xeroderma pigmentosum group B protein signature 719 738 - -
Mibi12g1375 769 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 293 455 IPR014001 -
Mibi12g1375 769 CDD DEXHc_XPB 274 443 - -
Mibi12g1375 769 Pfam Helicase conserved C-terminal domain 67 190 IPR032830 -
Mibi12g1375 769 Gene3D - 464 704 IPR027417 -
Mibi12g1375 769 PANTHER RAD25/XP-B DNA REPAIR HELICASE 56 738 - -
Mibi12g1375 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 457 IPR027417 -
Mibi12g1375 769 FunFam Probable DNA repair helicase RAD25 272 463 - -
Mibi12g1375 769 TIGRFAM rad25: DNA repair helicase rad25 52 765 IPR001161 GO:0003678|GO:0006289|GO:0006367
Mibi12g1375 769 MobiDBLite consensus disorder prediction 27 46 - -
Mibi12g1375 769 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 510 676 IPR001650 -
Mibi12g1375 769 SMART helicmild6 538 616 IPR001650 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1375 12 29437784 29444728 Mibi12g1375 12 29437784 29444728 ECH