Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1354 ATGTCTTCAGTTCGTAGATTCACAATGGCTGCCATCTCCAATTCCTTGTCCCTGAAGCACGGTCTCTCACTTTGGTGTCCTCGAGCTGGCTCTCTCACTCGACCTAACCCTTCTTCTTCTTCAATCAAGTTCAGAACTTCCACGAGATGCTACGCCGCTTTCGCTAATGAAAATCGGGAGTATGTGATTGTTGGGGGTGGAAATGCCGCAGGATATGCTGCTCGTACTTTCGTCGAGCATGGCATGGCGGATGGACGTTTATGTATTGTGACTAAAGAGGCATATGCGCCTTACGAGCGTCCTGCTTTAACAAAAGGTTATTTATTCCCGCCAGATAAGAACCCTGCGCGCCTTCCTGGATTTCACACTTGTGTTGGATCCGGTGGTGAGAGGCAGACTCCAGAGTGGTATGAGGAGAAAGGGATAGAGATGTTATATCAAGATCCAGTAAAAAGCATTGATCTTGAACAGCAAACATTGACAACAGACTCAGGAAAACTGCTGAAGTATGGTTCACTAATTATTGCGACAGGATGTACAGCCTCAAGATTCCCAGAGAAAATTGGGGGAAATCTACCTGGTGTTCATTACATCCGTGATGTTGCAGATGCTGACTCGCTAGTTTCATCATTGGGGAAAGCGCGCAAGGTAGTTGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCTGCTGTTGGCTGGCAGCTTGATACAACAATTATATTTCCTGAGGATCATTTGTTGCAAAGACTATTCACTCCTTCTCTTGCTCGAAGATATGAAGAACTCTACCAGAAGAATGGTGTCAAAATATTAAAGGGTGCTTCTATAAAAAACTTGGAAGCTGATTATAATGGGCATGTAACTGCTGTGAAACTTGGAGATGGATCTACTATAGATGCAGATACAGTAATTGTGGGAATTGGAGCAAAACCTGCAGTTGGTCCCTTTGAGAGGGTGGGTCTGAATAAAGAAGTTGGTGGCATACAGGTGGATGGTCTGTTTCGGACAAGTACTCCTGGAATCTTTGCTGTTGGTGATGTAGCAGCTTTCCCACTGAAGATATACGATCGTATCACCCGGGTTGAACATGTGGATCATGCTCGTCGCTCTGCACATCATTGCGTGAAAGCATTGCTCAGTGCACAAACTCACACGTATGATTATCTTCCATACTTCTATTCAAGGGTGTTTGAATATGAAGGGAGCTCCAGGAAAGTTTGGTGGCAGTTTTTCGGAGACAATGTTGGGGAAACAGTTGAAATTGGGAATTTCGATCCTAAAATTGCTACATTCTGGATTAAATCTGGCAAGCTAAAAGGAGTTCTTGTTGAAAGTGGGAGCCCTGAGGAATTTCAGCTGCTGCCCAAGCTTGCCAGAAGGCAGCCTGCGGTTGATAAAGCCAAACTTGAGAAGGCGTCTTCAGTGGAGGAGGCCCTAGCCATTGTTGGGGCATCCCTGGGTTGA 1473 0.4555 MSSVRRFTMAAISNSLSLKHGLSLWCPRAGSLTRPNPSSSSIKFRTSTRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKGYLFPPDKNPARLPGFHTCVGSGGERQTPEWYEEKGIEMLYQDPVKSIDLEQQTLTTDSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADSLVSSLGKARKVVVVGGGYIGMEVAAAAVGWQLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEADYNGHVTAVKLGDGSTIDADTVIVGIGAKPAVGPFERVGLNKEVGGIQVDGLFRTSTPGIFAVGDVAAFPLKIYDRITRVEHVDHARRSAHHCVKALLSAQTHTYDYLPYFYSRVFEYEGSSRKVWWQFFGDNVGETVEIGNFDPKIATFWIKSGKLKGVLVESGSPEEFQLLPKLARRQPAVDKAKLEKASSVEEALAIVGASLG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1354 490 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 387 475 IPR016156 GO:0016491|GO:0050660
Mibi12g1354 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 62 81 - -
Mibi12g1354 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 329 351 - -
Mibi12g1354 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 234 - -
Mibi12g1354 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 303 319 - -
Mibi12g1354 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 170 188 - -
Mibi12g1354 490 PANTHER APOPTOSIS-INDUCING FACTOR 1 59 481 - -
Mibi12g1354 490 Pfam Pyridine nucleotide-disulphide oxidoreductase 60 374 IPR023753 GO:0016491
Mibi12g1354 490 Gene3D - 394 480 IPR016156 GO:0016491|GO:0050660
Mibi12g1354 490 SUPERFAMILY FAD/NAD(P)-binding domain 60 403 IPR036188 -
Mibi12g1354 490 Gene3D - 184 311 IPR036188 -
Mibi12g1354 490 Gene3D - 62 376 IPR036188 -
Mibi12g1354 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 60 82 - -
Mibi12g1354 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 304 318 - -
Mibi12g1354 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 344 351 - -
Mibi12g1354 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 216 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1354 Mibi-ChrMibi12 29175428 29179636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1354 156 393 Acyl Lipid Metabolism Gene Families AT1G48030 24.419 2.56e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1354 12 29175428 29179636 Mibi12g1354 12 29175428 29179636 ECH