Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1287 ATGCCCCCATGGTCCACACTCGAATTTCCCATTCGGAACGCTATTCTGCTTCAAAGCTATGTTTATTATAGCACCTTGTTCCCCCCCTATTTTCTCACTCCCTCTACTCTCTCCCTCTCTCCCTGCTCACATTGCCCTTTCCTCTCTTCTGAGCAATGTGCTTCTGCCTCCTCCTCTGAATTTTGCTTCCTCAAAAACCCAATTTTCTCCTTCCTCTGTATTCCACTCACACCTTCTTCATCTTCAGTCATCATGACCCATTTCGCCAAATTCATCTCCCTATCTCCTTTTCTCTTATTTCTATGCTTACCATTGGCTCTTGCCGGTCATGACTATGGCCAGGCTCTGAGTAAGAGCATTCTCTTCTATGAAGCACAGAGATCTGGCATTCTCCCCCACAACCAAAGAGTCTCATGGAGGAGCCATTCTGGTCTCCACGATGGCAAGGCAAGCGGGGTAGATCTAGTAGGTGGGTACTACGATGCAGGGGACAATGTGAAGTTTGGTTTACCCATGGCTTTCACTGTCACAATGATGTCATGGAGTGTAATTGAGTATGGCAAACAAATGGCTTCCAATGGTGAGCTTGGATATGCCTTGGAAGCTATCAAATGGGGTACTGATTACTTCATCAAAGCCCACCCTGAACCCAATGTTCTCTACGGAGAGGTGGGAGATGGTAACAGTGACCATTACTGCTGGCAAAGGCCGGAGGAAATGACGACTGACAGAAAGGCTTACAGGATTGACACAAGCAATCCCGGGTCGGATCTCGCCGGAGAAACCGCCGCCGCCATGGCTGCCGCCTCCATCGTCTTCCGACGCTCCAATCCTGCTTACGCCGCCGAGCTTCTCCGCCATGCCTATCAGCTCTTTGACTTTGCGGACAAGTACAGAGGAAAGTACGACAGTAGCATCTCCGTGGCCAGGAAGTATTACCAATCAATCAGTGGCTACAATGACGAATTACTGTGGGCTGCTGCTTGGTTGTATCAAGCAAGCAACAACCAATATTACTTAGACTACCTTGGCAGAAATGGTGATTCCATGGGTGGAACTGGTTGGTCCATGAATGAATTTGGATGGGACGTTAAGTATGCTGGTGTTCAGACTCTTGTGGCTAAGTTCTTAATGCAAGGAAGAGCTGGTCATAATGCAGCAGTGTTCGAGAAATACCAATATAAAGCAGAAGATTTCATGTGTTCATGCCTTGGAAAGGGAAATCGCAATGTGCAGAAGACACCTGGTGGCCTAATTTTCCGTCAGAGATGGAACAACATGCAGTTTGTGACAAGTGCTTCCTTCTTAGCCACTGTCTACTCCGACTACCTCGCTTCATCCGGCCGGAACCTTAGATGTCCTTCCGGAAATGTCTCTCCAGCTCAGCTTTTGTCACTTGCCAAATCTCAAGTTGATTACATTCTTGGAGACAATCCAAGAGGGACTAGTTATATGGTTGGTTATGGAACCACCTTCCCTCAAAGGGTTCATCACAGGGGATCCTCAATTGTCTCATACAAGGTTAATCCTACGTTTGTCACATGTCGTGGAGGTTATGCCACTTGGTTTAGCCGGAAAGCAAGCGACCCCAATTTGCTTACTGGTGCAGTTGTTGGTGGACCTGATGCTTATGATAACTTTGCTGATCAAAGAGATAATTATGAACAAACTGAGCCTGCCACTTACAATAATGCTCCTCTCATTGGTATCCTAGCTCGTTTGAGTTCTGGCCATGGTGGTTATAATCAGCTTCTTCCAGTTGCTGTTCCAACTCCTACACCTGTTATCACCAAACCAAAACCAGCTCCCAAACCCAAGGTTACTCCAGCACCAGTATCATCTTCAGGTCCTATTTCGATTCAGCAGAAGATGACCACTTCCTGGGTTGCCAGTGGTAAAACTTACTACAGGTATTCAACTGTGGTGACTAACACATCTCCCAAGACTCTCAAGTCTCTGAACCTTTCAATATCTAATATTTATGGTCCAATCTGGGGACTCACTAAGTCAGGTGATTCCTACACTTTCCCGGCATGGCTCAACTCTCTGTCAGCCGGTAAGAGCCTCGAGTTCGTGTACATTCATGCTGCTTCTCCAGCAGATGTCTCTGTTGCCAATTATTTGCTGGCCTGA 2133 0.4707 MPPWSTLEFPIRNAILLQSYVYYSTLFPPYFLTPSTLSLSPCSHCPFLSSEQCASASSSEFCFLKNPIFSFLCIPLTPSSSSVIMTHFAKFISLSPFLLFLCLPLALAGHDYGQALSKSILFYEAQRSGILPHNQRVSWRSHSGLHDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSVIEYGKQMASNGELGYALEAIKWGTDYFIKAHPEPNVLYGEVGDGNSDHYCWQRPEEMTTDRKAYRIDTSNPGSDLAGETAAAMAAASIVFRRSNPAYAAELLRHAYQLFDFADKYRGKYDSSISVARKYYQSISGYNDELLWAAAWLYQASNNQYYLDYLGRNGDSMGGTGWSMNEFGWDVKYAGVQTLVAKFLMQGRAGHNAAVFEKYQYKAEDFMCSCLGKGNRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSGRNLRCPSGNVSPAQLLSLAKSQVDYILGDNPRGTSYMVGYGTTFPQRVHHRGSSIVSYKVNPTFVTCRGGYATWFSRKASDPNLLTGAVVGGPDAYDNFADQRDNYEQTEPATYNNAPLIGILARLSSGHGGYNQLLPVAVPTPTPVITKPKPAPKPKVTPAPVSSSGPISIQQKMTTSWVASGKTYYRYSTVVTNTSPKTLKSLNLSISNIYGPIWGLTKSGDSYTFPAWLNSLSAGKSLEFVYIHAASPADVSVANYLLA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1287 710 Pfam Glycosyl hydrolase family 9 112 571 IPR001701 GO:0004553|GO:0005975
Mibi12g1287 710 SMART CBM49_2 618 698 IPR019028 GO:0030246
Mibi12g1287 710 MobiDBLite consensus disorder prediction 596 618 - -
Mibi12g1287 710 FunFam Endoglucanase 108 579 - -
Mibi12g1287 710 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 547 565 IPR033126 -
Mibi12g1287 710 SUPERFAMILY Six-hairpin glycosidases 109 589 IPR008928 GO:0005975
Mibi12g1287 710 MobiDBLite consensus disorder prediction 596 610 - -
Mibi12g1287 710 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 473 499 IPR018221 -
Mibi12g1287 710 Pfam Carbohydrate binding domain CBM49 618 695 IPR019028 GO:0030246
Mibi12g1287 710 Gene3D - 109 577 IPR012341 GO:0005975
Mibi12g1287 710 PANTHER ENDO-1,4-BETA-GLUCANASE 93 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1287 Mibi-ChrMibi12 28452233 28456640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1287 102 710 Glycoside Hydrolase AT1G64390 80.131 0.0 1031
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1287 12 28452233 28456640 Mibi12g1287 12 28452233 28456640 ECH