Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1265 ATGTCCATCTCCTTGAGCTGTTTTTGTTCCAAGAAGGTTAGACAAAAGGCAAAGCATGAACAGCACATTATTCTTTCTTCAGAGACATGGTTCACAATTAATGAGGTGGAGGCTCTGCTTGACTTATATAAAATGCTAAGCAGTTCAATTGTTGATGATGGCCTTATTCACAAGGAGGAGTTCCGGCTTGCCCTTTTCCAAAACAGCAGGAAAGAGAATCTATTTGCAGACAGGGTGTTTGATATGTTTGATACTAAGCATAATGGAGCAATTGACTTTGAGGAATTTGTCCGGTCACTGAGCATCTTTCATCCAAATGCTCCTACAGAGATGAAGATTGCATTTGCATTTAAATTGTATGATCTTCGGAAGACTGGATACATTGAGCGCAATGAGTTGAAGGAGATGGTCTTGGCTGCTCTGGCTGAATCAGATCTAGTAGTTTCAGATGATATTGTTGAAGCAATTGTGGACAAGGACGCAGACTCAAATGGTGATGGGAAGATCGATGAAGAGGAGTGGAAAGAATTTGTGGCAAAGTATCCATCTCTCCTAAAGATGATGACTCTTCCATGTCTAAGGGACATAACCATGTCTTTCACCAATTTCTTATTTAACACCCAGGTGGAAGATGAAGAGCACCGACATTAG 651 0.4086 MSISLSCFCSKKVRQKAKHEQHIILSSETWFTINEVEALLDLYKMLSSSIVDDGLIHKEEFRLALFQNSRKENLFADRVFDMFDTKHNGAIDFEEFVRSLSIFHPNAPTEMKIAFAFKLYDLRKTGYIERNELKEMVLAALAESDLVVSDDIVEAIVDKDADSNGDGKIDEEEWKEFVAKYPSLLKMMTLPCLRDITMSFTNFLFNTQVEDEEHRH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1265 216 PRINTS Recoverin family signature 126 144 - -
Mibi12g1265 216 PRINTS Recoverin family signature 79 100 - -
Mibi12g1265 216 SUPERFAMILY EF-hand 26 203 IPR011992 -
Mibi12g1265 216 FunFam calcineurin B-like protein 3 21 211 - -
Mibi12g1265 216 Gene3D - 24 212 - -
Mibi12g1265 216 PANTHER CALCINEURIN B 6 211 IPR045198 GO:0005509|GO:0019722|GO:0019900
Mibi12g1265 216 ProSitePatterns EF-hand calcium-binding domain. 162 174 IPR018247 -
Mibi12g1265 216 ProSiteProfiles EF-hand calcium-binding domain profile. 148 184 IPR002048 GO:0005509
Mibi12g1265 216 ProSiteProfiles EF-hand calcium-binding domain profile. 71 106 IPR002048 GO:0005509
Mibi12g1265 216 Pfam EF-hand domain pair 111 177 IPR002048 GO:0005509
Mibi12g1265 216 Pfam EF hand 77 98 IPR002048 GO:0005509
Mibi12g1265 216 ProSiteProfiles EF-hand calcium-binding domain profile. 108 143 IPR002048 GO:0005509
Mibi12g1265 216 SMART efh_1 112 140 IPR002048 GO:0005509
Mibi12g1265 216 SMART efh_1 151 181 IPR002048 GO:0005509
Mibi12g1265 216 SMART efh_1 75 103 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1265 Mibi-ChrMibi12 28241381 28244213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1265 5 211 EF-hand Containing Proteins AT4G17615 56.190 5.52e-84 246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1265 12 28241381 28244213 Mibi12g1265 12 28241381 28244213 ECH