Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1249 ATGCCTGGTTTGGTTTCAGTCAAAACGCCACCGGACGCTGCTCCACTTCGAATTTCAGTACCAGAAGCACAAACTCCACAGAGATCTACAGATTCCACTAACATCAAAACACCATCTCCTCTTCCTAAGAAACCACCTTCTCCTTCACCTTCTTCACGTGCAAAACCCTCACCAGATCGCAGGAAAAAGCCTCCTCCTGATTCCCCTAACCCTGCTCTCTCCGAAGCTTCCCTCGATAATCCCGATCTCGGTCCCTTCCTTCTCAAGCTCGCACGTGACACCATCGCCTCCGGCGAAGGCCCTGCGAAGGCTCTTGATTATGCTATTAGGGCTTCGAAATCTTTCGAGCGATGTGCGGTTGAAGGTGAGCCTAGTTTGGATTTCGCCATGAGTTTGCACGTGCTTGCTGCTATTTACTGTAGCTTAGGGAGGTTTGAAGAGGCCGTGCCTGTGCTTGAACGTGCGATCCAGGTTCCTGATGTATCTAAGGGTTCGGATCACGCTCTTGCTGCTTTCTCTGGTCATATGCAGTTGGGAGATACTTTCTCTATGCTTGGCCAAGTTGATAAGTCCATCTCGTGTTATGATGAAGGATTGAAAATTCAGATCGAGGCTTTGGGTGAGACGGATCCGAGAGTCGGAGAAACTTGCAGATACTTAGCTGAGGCCAACGTTCAAGCAATGCAGTTTGATAAAGCAGAGGAGCTGTGCAAAAAAACTCTTGAGATTCATAGAGCGCACAGTGAACCAGCATCTCTTGAAGAAGCAGCAGATAGAAGGCTTATCGCACTTGTATGTGAGGCAAAGGGAGATTATGAGTCAGCTCTTGAGCACCTTGTCCTTGCCAGTATGGCAATGATTGCAAATGGACAAGACAGTGAAGTTGCTTCTATTGATGTCAGCATTGGAAACATCTATATGTCTCTTTGTCGCTTTGATGAAGCTATCTTCTCCTATCAGAAGGCCCTTACTGTGTTCAAATCATCAAAGGGGGAAAACCATCCTTCAGTGGCATCTGTTTTTGTTCGCCTTGCTGATTTGTATCACAGAACTGGAAAATTAAGAGAGTCCAAATCTTATTGTGAAAATGCTCTAAGAATATACTCAAAGCCTGTTCCGGGAACGACACCAGAAGAGATAGCTACTGGGTTGACAGAAGTTTCAGCCATCTTTGAATCTGTAGATGAGCCTGAAGAGGCTCTGAAACTCCTGCAAAAGGCAATGAAGTTATTGGAAGATAAACCAGGACAGCAGAGCACTATTGCTGGCATAGAAGCACGAATGGGTGTGATGTTTTACATGATTGGGAGGTATGAAGAATCAAGGAACTCTTTTGAAAGTGCTGTGGCAAAACTTAGAGCCAGTGGGGAAAGGAAATCTGCCTTTTTTGGGGTTGTTTTGAACCAGATGGGATTGGCATGCGTACAACTATTCAAGATAGATGAGGCTGCTGAATTATTTGAAGAAGCTAGGGCAATTCTTGAACAGGAGTGTGGTCCATGCCATCAAGATACTCTTGGAGTATACAGCAATCTTGCAGCAACTTATGATGCTATGGGAAGAGTGGGAGATGCAATTGAAATCTTGGAGTACGTCCTTAAATTGAGGGAAGAAAAGCTTGGAATAGCAAATCCTGATTTTGAAGATGAGAAGCGAAGGCTGGCTGAGCTTCTGAAAGAAGCTGGCAAGACACGTGACAGAAAAGCGAAATCTCTGGAAAACCTCATCGATCCCAGCTCAAAGAGGACAAGGAAGGAGGGCGGAAAGAGGTGGCCAGGCTTGGGTTTTAGAATTTGA 1797 0.4574 MPGLVSVKTPPDAAPLRISVPEAQTPQRSTDSTNIKTPSPLPKKPPSPSPSSRAKPSPDRRKKPPPDSPNPALSEASLDNPDLGPFLLKLARDTIASGEGPAKALDYAIRASKSFERCAVEGEPSLDFAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVSKGSDHALAAFSGHMQLGDTFSMLGQVDKSISCYDEGLKIQIEALGETDPRVGETCRYLAEANVQAMQFDKAEELCKKTLEIHRAHSEPASLEEAADRRLIALVCEAKGDYESALEHLVLASMAMIANGQDSEVASIDVSIGNIYMSLCRFDEAIFSYQKALTVFKSSKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTPEEIATGLTEVSAIFESVDEPEEALKLLQKAMKLLEDKPGQQSTIAGIEARMGVMFYMIGRYEESRNSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARAILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPSSKRTRKEGGKRWPGLGFRI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1249 598 Gene3D Tetratricopeptide repeat domain 174 283 IPR011990 GO:0005515
Mibi12g1249 598 ProSiteProfiles TPR repeat profile. 296 329 IPR019734 GO:0005515
Mibi12g1249 598 FunFam Protein KINESIN LIGHT CHAIN-RELATED 2 458 575 - -
Mibi12g1249 598 SMART tpr_5 296 329 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 338 371 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 129 162 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 256 289 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 381 414 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 464 497 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 214 247 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 506 539 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 172 205 IPR019734 GO:0005515
Mibi12g1249 598 SMART tpr_5 422 455 IPR019734 GO:0005515
Mibi12g1249 598 MobiDBLite consensus disorder prediction 563 592 - -
Mibi12g1249 598 Gene3D Tetratricopeptide repeat domain 284 462 IPR011990 GO:0005515
Mibi12g1249 598 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 29 580 - -
Mibi12g1249 598 SUPERFAMILY TPR-like 129 536 IPR011990 GO:0005515
Mibi12g1249 598 Coils Coil 547 567 - -
Mibi12g1249 598 MobiDBLite consensus disorder prediction 563 598 - -
Mibi12g1249 598 Pfam MalT-like TPR region 133 283 IPR041617 -
Mibi12g1249 598 Pfam Tetratricopeptide repeat 295 369 - -
Mibi12g1249 598 Pfam Tetratricopeptide repeat 466 538 - -
Mibi12g1249 598 MobiDBLite consensus disorder prediction 1 80 - -
Mibi12g1249 598 Gene3D Tetratricopeptide repeat domain 77 173 IPR011990 GO:0005515
Mibi12g1249 598 SUPERFAMILY TPR-like 380 537 IPR011990 GO:0005515
Mibi12g1249 598 Gene3D Tetratricopeptide repeat domain 463 577 IPR011990 GO:0005515
Mibi12g1249 598 MobiDBLite consensus disorder prediction 22 38 - -
Mibi12g1249 598 MobiDBLite consensus disorder prediction 39 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1249 Mibi-ChrMibi12 28082366 28085309 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1249 12 28082366 28085309 Mibi12g1249 12 28082366 28085309 ECH