Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1248 ATGGCGATTGCTTCACACTCTACTCCGAGCTTCTCACCTTCTTTCTGCTCAACTCGGACCCAATTAACTCGCCTCTCGCGCTTCTCTTCCGTCACTTTATCTCACTCTCGCTCCAACCAAACTCGCTCGTTAACTCGTCGACTTGTATCGTCTTGCCTCAATTCATCTAAATTCTCCGATGCTGATGGTTTTGTCTCGCCAGGAAATGAAAATTTCCCCTACGAATTCCAACACGATTCTTCACCTCAGAGTCAGAGGAAGGGCTCGTCGGTGTACGTCTCTCTTCCGTTAGATGCCGTAGGCTTCGATGGGCGAGTCATGAGGCAGAAAACTATGGGCGCTTCTTTTATGGCTCTCGCTTCGGCTGGTGTTGAAGGCGTGGTTATGGAGATTTGGTGGGCTTTAGTTGAGAATAATGAGCCTATGGTTTACAATTGGAGAGGTTATTTGCAGCTCCTCAAGCTGGCTGGGACTTACGGCTTGAAGGTTCGAGTTGTTCTTGCGTTTCATCAGTGTGGTACGGACCCTACTGATCGTAAATGGATACCTCTTCCTCAGTGGGTGACTGATGAGATAAAAAAAGATCCAGATTTAGTATATTCAGATAGGTTTGGGACGAGAAGTACTGAGTACATCTCACTTGGATGTGATACACTTCCTGTGCTCCGTGGACGATCTCCGATTCAGGCATATGCTGATTTTATGAGGAACTTCAGGGACGCCTTCAGGCCTTACTTTGGCATTATCATAACGGGAATACAGATTGGTATGGGTCCTGGCGGTGAATTAAGATATCCTATAAGCCCTTCCCAGTTAACCAATGATTGGCACGCTGAATATGGAGAATTTCAGTGCTATGATAAGTATATGATTGCATCACTAGATGGTTGTGCAAGAGAATTTGGAATGTCTGTATGGGGGCAAGGTGCTCCACGTGACAGTAGCACTGAAAGTTCCATGCACAAAGTGAACTCGCCACAGCGTGAGTATGGCCCTTTAGCGACGGACCACGGTAGGTTTTTCCTTGAGTGGTACTCAGGAATGTTGCTTCTGCATGGAGAAAGAATTTGTAGGGAAGCTGAAGCTATATTTAGGGGTACAGAAGTCAACTTATCAGGAAAAGTGGCTGCTATTCACTGGGACTACCTGACTAATACCCATCCATCAGAATTAGTCGCTGGATATTACAATATTTCTGAGAGGAATGGATACTTACCCATTGCTCGCATGTTTAGTAAGTATGGATTTGGCATATGCTGCTCATGTTTTGAAATGCAAGATGTTATGGTAAATAAGACGAACCCAGCTGGCAGCCCAGAAGGTTTTCTGAGACAGTTGCTATTGGCTGCTAGGCTCTGTGACATACAACTGGAAGGTCAGAATTTTTCACCCAATCTCAATGATATATCATTCGAGCAGGTGCTGAAGATGTCAAAGTATTACACAGAAGGGGTTGAAAAACGTCCCTTCTCTTTCACCTTTGTGAGGATGAGCGGGAAAATGTTTGAATATCGTTTTTGGGATCCATTTACTCGCTTTGTTAGGCAATTGTCAGATGGAAGTAATTTTCGAGCCAGATTAAATTCTGTTGGTGACTCTCGTCCCAAGTCCTTGACCTTGACTAGATCTTTAGAAGTTGGACTCCTGTGCTAG 1653 0.4495 MAIASHSTPSFSPSFCSTRTQLTRLSRFSSVTLSHSRSNQTRSLTRRLVSSCLNSSKFSDADGFVSPGNENFPYEFQHDSSPQSQRKGSSVYVSLPLDAVGFDGRVMRQKTMGASFMALASAGVEGVVMEIWWALVENNEPMVYNWRGYLQLLKLAGTYGLKVRVVLAFHQCGTDPTDRKWIPLPQWVTDEIKKDPDLVYSDRFGTRSTEYISLGCDTLPVLRGRSPIQAYADFMRNFRDAFRPYFGIIITGIQIGMGPGGELRYPISPSQLTNDWHAEYGEFQCYDKYMIASLDGCAREFGMSVWGQGAPRDSSTESSMHKVNSPQREYGPLATDHGRFFLEWYSGMLLLHGERICREAEAIFRGTEVNLSGKVAAIHWDYLTNTHPSELVAGYYNISERNGYLPIARMFSKYGFGICCSCFEMQDVMVNKTNPAGSPEGFLRQLLLAARLCDIQLEGQNFSPNLNDISFEQVLKMSKYYTEGVEKRPFSFTFVRMSGKMFEYRFWDPFTRFVRQLSDGSNFRARLNSVGDSRPKSLTLTRSLEVGLLC 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1248 550 Pfam Glycosyl hydrolase family 14 92 511 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 SUPERFAMILY (Trans)glycosidases 87 527 IPR017853 -
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 333 352 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 166 187 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 404 427 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 369 385 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 123 137 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 258 280 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 386 397 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 144 162 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 442 464 IPR001554 GO:0000272|GO:0016161
Mibi12g1248 550 Gene3D Glycosidases 79 543 - -
Mibi12g1248 550 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 34 521 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1248 Mibi-ChrMibi12 28075366 28078313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1248 57 524 Glycoside Hydrolase AT4G17090 43.737 8.78e-137 406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1248 12 28075366 28078313 Mibi12g1248 12 28075366 28078313 ECH