Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1237 ATGATGGACAGTCTCAAGTACCTCATCGGTTGGCCGGGGCCGTCTGGATTCGGCTCCAGCTCCACCGCCGAACAAGTCACCACCACCACCTCCTCCTCCCTCACCGCCATCATCACAGGGGCGACATCGGGGATAGGGGCAGAGACGGCCAGGGTTCTAGCGAAGAGAGGAGTGAGGCTGATTCTTCCGGCGAGAACAGTGAAAGCTGCTGAAGAAACAAAAGCGAGAATCCTCTCTGAATCTCCCAACTCTCAAATCATTGTGCTGCCTCTTGATCTTAGTTCTCTTCACTCTGTTCGCTCCTTTGTCTCTCACTTCCATTCCCTCCATTTACCCCTCCACCTTCTCATAAACAACGCCGGAAAGTTTGCGCACCATCACTCAATCTCCGAGGATGGATTTGAGATGACCTTTGCCACTAATTATCTAGGTCATTTTCTGTTGACGGAGTTGTTGTCGAACACGATTGTGGAGACGGCGGAGAAGACGGGCATCCAAGGGCGGATCGTCAACGTGTCTTCAAATGTACATGCCTGGTTTTCCGGCGACATTATGCAATATCTAGCTCTCATTACCCGCCACAACAGCCATTACGATCCCACACGTGCTTATGCTCTGTCCAAGCTTGCCAACGTCTTACACACCAGGCATCTTGCTCTTCAACTCCAGGAAATGGGAGCGAACGTGACAGTGAATTGCGTTCATCCGGGGATTGTGAGGACCAGGCTCACCAGGGAACGTGAAGGCTTACTTACAGATATAGGGTTCTTGCTCACTTCCAAATTCTTGAAAACCATTCCCCAGGCAGCAGCAACGACATGTTACGTGGCAACACATCCGAGGCTGTTGAATGTGTCCGGCAAGTACTTTGCTGACTGCAACGAAGCTTCCATCTCTAAACTTGCATCTAATTCAATGGAAGCTGGAAGGTTGTGGACAGCTTCCCAATCTATGATCTCTCATGGACCCAAATCTCTTCTACATCTCATCGACAACCATGAATCAGATTAA 1011 0.5015 MMDSLKYLIGWPGPSGFGSSSTAEQVTTTTSSSLTAIITGATSGIGAETARVLAKRGVRLILPARTVKAAEETKARILSESPNSQIIVLPLDLSSLHSVRSFVSHFHSLHLPLHLLINNAGKFAHHHSISEDGFEMTFATNYLGHFLLTELLSNTIVETAEKTGIQGRIVNVSSNVHAWFSGDIMQYLALITRHNSHYDPTRAYALSKLANVLHTRHLALQLQEMGANVTVNCVHPGIVRTRLTREREGLLTDIGFLLTSKFLKTIPQAAATTCYVATHPRLLNVSGKYFADCNEASISKLASNSMEAGRLWTASQSMISHGPKSLLHLIDNHESD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1237 336 PRINTS Glucose/ribitol dehydrogenase family signature 204 223 IPR002347 -
Mibi12g1237 336 PRINTS Glucose/ribitol dehydrogenase family signature 35 52 IPR002347 -
Mibi12g1237 336 PRINTS Glucose/ribitol dehydrogenase family signature 227 244 IPR002347 -
Mibi12g1237 336 PRINTS Glucose/ribitol dehydrogenase family signature 161 177 IPR002347 -
Mibi12g1237 336 PRINTS Glucose/ribitol dehydrogenase family signature 111 122 IPR002347 -
Mibi12g1237 336 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 175 IPR002347 -
Mibi12g1237 336 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 204 223 IPR002347 -
Mibi12g1237 336 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 111 122 IPR002347 -
Mibi12g1237 336 PANTHER RETINOL DEHYDROGENASE 14 319 - -
Mibi12g1237 336 Gene3D - 22 321 - -
Mibi12g1237 336 Pfam short chain dehydrogenase 35 176 IPR002347 -
Mibi12g1237 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 296 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1237 Mibi-ChrMibi12 27982724 27985882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1237 37 245 Acyl Lipid Metabolism Gene Families AT1G63380 29.907 1.55e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1237 12 27982724 27985882 Mibi12g1237 12 27982724 27985882 ECH