Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1197 ATGGCAGCGACTAGGGTTTTCGGAGCTTGTAGTAGAGCATTGATGGCGGCGGCGTCGAAGGGTGCGGCGTCTGGTGTTAAAACTTCTTCTGCTGCTTCGAAGACGACGACGACGACGGCACCGAAAGGTCGAGGCAACGCCTTACAGAAGATAATCCCTGTTTCTCCTCAGCTTGGAAAGTTTCTTGGTGCCTCTGAAGCTTCACGCGTTGATGCTGTTAAGAAAGTTTGGGAGCACATTAAACTCCACAACCTTCAGAATCCAACAAACAAGAGGGAAATTGTTTGCGATGAGAAGTTGAAGACCATATTTGATGGGAAAGATAAAATATCTTTCACAGAGATTGCCAGATATCTGTCCAACCATTTTGTGAAATCGAGCTAA 384 0.4635 MAATRVFGACSRALMAAASKGAASGVKTSSAASKTTTTTAPKGRGNALQKIIPVSPQLGKFLGASEASRVDAVKKVWEHIKLHNLQNPTNKREIVCDEKLKTIFDGKDKISFTEIARYLSNHFVKSS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1197 127 SUPERFAMILY SWIB/MDM2 domain 45 125 IPR036885 -
Mibi12g1197 127 Gene3D SWIB/MDM2 domain 43 127 IPR036885 -
Mibi12g1197 127 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 31 124 - -
Mibi12g1197 127 CDD SWIB-MDM2_like 53 123 - -
Mibi12g1197 127 MobiDBLite consensus disorder prediction 25 44 - -
Mibi12g1197 127 ProSiteProfiles SWIB/MDM2 domain profile. 47 125 IPR003121 -
Mibi12g1197 127 Pfam SWIB/MDM2 domain 52 123 IPR003121 -
Mibi12g1197 127 SMART swib_2 48 127 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1197 Mibi-ChrMibi12 27457026 27458830 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Mibi12g1197 SWIB 1.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1197 12 27457026 27458830 Mibi12g1197 12 27457026 27458830 ECH