Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1172 ATGGATGCTATAAGGAAGCAAGCTACCAAATTAAGGGAGCAAGTTGCCAAGCAGCAGCAGGCTATACTTAGACAATTAGGCCAAATTAGCAATGAACCGCTAATAACAGATGAATCAGAAGTTCAATGTCACCAACAACTTCGAAAATTATACAACTCTACAAAAGCAGCCAAGAATTTTCAGCGGCACATTGTTCGTGGTATTGAAGGTTTAACCTCTGTTAGTGTAAAGCAGATGGACATAGTAAGGAAGTTGGCTAAAGAGTGTTGTAAGTATGGGACTGAGAATGAAAACAGTGAATATCCTCTTGCAAGGGCTTCTCTTCACATGGGTAACTCATATGATTTGATGGAAAATGAAAGGGAGACTTTGCTTTCAATCTACAGTCATCAGGTATCTGAGCCATTACGGGCACAAATTACCGGAGCTCCTTTGGAGGATGCACGCCACCTCACTTGTCGCTATGACAAACTTTTTCAAGAGGTTGAAAATCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGGATTCTTCTGTTTCTGCAGAGAACTCCATAAAGCTTCAAAATGCAGAGACAAGGTTGAAAGAACTTAAATCAGCCTTGGTGGCACTTGGTAGAGAAGCAACTGCTGCTATGGTGTCAGTTGAAGATGAACAACAACAGATAACTCTCAAGAGCCTTCGTACAATGGTTGATGCTGAGAGATCTTATCATGAGCATGCCCTTGTTATTCTAGAGAAGCTATATTCTGAGATGATTCTGGAGAAGCAATCAAAAGAGTCTCCTTCCATGCCATTGCCAAGAGATGGATATAATCCACCTATACCTGAGAATGCTAATCAAAATGGTTTTAATCATCAAGGCAATGATCCAACAGGCACCTGTTATTTTGCAAAGGTGGTACACCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGTTTATCAATTGATGATTATGTTGTAGTTCGACAGGTATCTGCGCATGGATGGTCAGAAGGAATATGCAAAGGCAATGCGGGATGGTTTCCCTCTGCATATGTAGAGAGAGAGGACAAGATACCAGCGAGTGTGGCAATGGAAATAACATCAACATCTTGA 1104 0.4167 MDAIRKQATKLREQVAKQQQAILRQLGQISNEPLITDESEVQCHQQLRKLYNSTKAAKNFQRHIVRGIEGLTSVSVKQMDIVRKLAKECCKYGTENENSEYPLARASLHMGNSYDLMENERETLLSIYSHQVSEPLRAQITGAPLEDARHLTCRYDKLFQEVENQAAEVLRRRSKLRDSSVSAENSIKLQNAETRLKELKSALVALGREATAAMVSVEDEQQQITLKSLRTMVDAERSYHEHALVILEKLYSEMILEKQSKESPSMPLPRDGYNPPIPENANQNGFNHQGNDPTGTCYFAKVVHPFDAQAEGELSLSIDDYVVVRQVSAHGWSEGICKGNAGWFPSAYVEREDKIPASVAMEITSTS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1172 367 Coils Coil 159 179 - -
Mibi12g1172 367 PANTHER SH3 DOMAIN-CONTAINING 19 351 - -
Mibi12g1172 367 Coils Coil 182 209 - -
Mibi12g1172 367 ProSiteProfiles Src homology 3 (SH3) domain profile. 295 354 IPR001452 GO:0005515
Mibi12g1172 367 Coils Coil 1 21 - -
Mibi12g1172 367 Pfam Variant SH3 domain 302 350 IPR001452 GO:0005515
Mibi12g1172 367 Gene3D SH3 Domains 283 365 - -
Mibi12g1172 367 SUPERFAMILY SH3-domain 297 355 IPR036028 GO:0005515
Mibi12g1172 367 SUPERFAMILY BAR/IMD domain-like 42 254 IPR027267 -
Mibi12g1172 367 MobiDBLite consensus disorder prediction 260 290 - -
Mibi12g1172 367 Gene3D Arfaptin homology (AH) domain/BAR domain 2 257 IPR027267 -
Mibi12g1172 367 SMART SH3_2 298 353 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1172 Mibi-ChrMibi12 27016632 27020842 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1172 12 27016632 27020842 Mibi12g1172 12 27016632 27020842 ECH