Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1170 ATGCCTCAAGAGCAGGTGGGACTGGGGTCTTTTCGAAGGAGCCTATCAAGGAGGCGCTCCTTAAGGTCTGGGGTGGATACGGATGATAGGGGTTGGACTTCACTTCATGTTTACGCTCGTAAAGGGGATCTCAAATTCGTTAAAAAGCTTATTGACGAAGGAATGGATGTGAATGTTGTTGCATGGGGTCCAAAATCAAAAGGTGTGACCCCACTTCATCTTGCTGCGGAAGGTGGCCACCTTGAAGTCATGGATGAATTACTTGACCGTGGCGCTGACATTGATGCAAGGACTAAGGGTGCTTGTGGCTGGACACCCCTCCATGTTGCAGCTAAAGAAAGGAGGAGGGCAGCGGTGAAATACTTGGTAGAGAATGGAGCATTCTTGCCTCCAGATATCAACGATTGCAGATTCAATCCCCCAGTTCATTATTGCCCAGGACTTGAATGGGCCTATGAGGAATTGAAGCGACTTCGATATGAAAACTCGTCATCATCTGAGGAGACCTCTTGCAGCTCAGAAAACTGA 528 0.483 MPQEQVGLGSFRRSLSRRRSLRSGVDTDDRGWTSLHVYARKGDLKFVKKLIDEGMDVNVVAWGPKSKGVTPLHLAAEGGHLEVMDELLDRGADIDARTKGACGWTPLHVAAKERRRAAVKYLVENGAFLPPDINDCRFNPPVHYCPGLEWAYEELKRLRYENSSSSEETSCSSEN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1170 175 ProSiteProfiles Ankyrin repeat region circular profile. 102 127 - -
Mibi12g1170 175 ProSiteProfiles Ankyrin repeat profile. 102 127 IPR002110 GO:0005515
Mibi12g1170 175 ProSiteProfiles Ankyrin repeat profile. 67 99 IPR002110 GO:0005515
Mibi12g1170 175 ProSiteProfiles Ankyrin repeat region circular profile. 30 59 - -
Mibi12g1170 175 Pfam Ankyrin repeat 102 127 IPR002110 GO:0005515
Mibi12g1170 175 Gene3D - 12 63 IPR036770 -
Mibi12g1170 175 SMART ANK_2a 102 135 IPR002110 GO:0005515
Mibi12g1170 175 SMART ANK_2a 30 59 IPR002110 GO:0005515
Mibi12g1170 175 SMART ANK_2a 67 96 IPR002110 GO:0005515
Mibi12g1170 175 Gene3D - 64 167 IPR036770 -
Mibi12g1170 175 SUPERFAMILY Ankyrin repeat 27 145 IPR036770 -
Mibi12g1170 175 PRINTS Ankyrin repeat signature 118 132 IPR002110 GO:0005515
Mibi12g1170 175 PRINTS Ankyrin repeat signature 68 83 IPR002110 GO:0005515
Mibi12g1170 175 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 28 143 - -
Mibi12g1170 175 ProSiteProfiles Ankyrin repeat profile. 30 62 IPR002110 GO:0005515
Mibi12g1170 175 Pfam Ankyrin repeats (3 copies) 23 97 IPR002110 GO:0005515
Mibi12g1170 175 ProSiteProfiles Ankyrin repeat region circular profile. 67 99 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1170 34 152 Acyl Lipid Metabolism Gene Families AT5G53470 35.294 8.44e-14 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1170 12 26986264 26987785 Mibi12g1170 12 26986264 26987785 ECH