Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1095 ATGGATCGATTAATCAGGAGTAATCGATTTCTCTCCGATTGCTGCTTCGTATTCTTCATTTTCTCCGTCGCCTTATTCCAAAACGCGGCGTCGTTTAACCTCACCACCACTTCCTTCGACGACGCCTACTCTCCTCTGTTCGGCGACGGCAACGTCGTTCGGTCTCCCGATGGCAACGCCGTTCGTCTCCTCCTCGATCGCTTCACCGGTTCTGGTTTCATCTCCTCCAGTATGTACCAGTACGGATTCTTCAGCGCCAATATCAAATTGCCTTCCGATTATACAGCTGGCGTTTGCGTCGCCTTTTATACATCAAACGGTGATGTATTCGAGAAGACTCACGACGAGTTGGATTTCGAGTTCTTAGGCAATATTGCAGGAAAACCATGGAGGTTTCAGACGAACTTGTACGGCAACGGAAGCACACATCGTGGGCGTGAGGAACGATACCGTCTCTGGTTCGATCCAACCAAAGAGTTTCACAGATACAGCATTCTTTGGACCCCAACCAATATCATATTTTACATAGACGAAGTACCAGTAAGAGAGGTAAAAAGAAGTGAGGAAATGGGTGGTGATTACCCATCAAAGCCAATGTCACTATATACAACCATATGGGATGCTTCAAATTGGGCCACTTCAGGTGGAAAATACAAAGTGAACTACAAATACGCTCCTTTTGTATCAGAGTTCAAGGACCTCGTCATTGACGGTTGCCCCGTTGACCCCATCCAACAAGTCCCCGCCGGCGCTTGCTCCGACCACCATGCCCAGCTCGAAGCCGGAGACTACGCCGTGATAACTCCGGCACGCCGCCTTGCCATGCGGAGGTTCCGGGAGCGTTACATGTACTACTCATACTGCTATGATACATTGAGGTACCCTGTGACACCACCGGAGTGTGTTATTATACCTTCGGAGAGGCAGAGATTTCAGGAAACCGGAAGGTTGAGGTTTGGCGGCAGCCACCGTCCACGGCGGTCCCGACGGGGAAGTCGTAGTTCAACGCCGGTGGATAAGAGTGAACAGGCTGATATGAGATGA 1044 0.5019 MDRLIRSNRFLSDCCFVFFIFSVALFQNAASFNLTTTSFDDAYSPLFGDGNVVRSPDGNAVRLLLDRFTGSGFISSSMYQYGFFSANIKLPSDYTAGVCVAFYTSNGDVFEKTHDELDFEFLGNIAGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKEFHRYSILWTPTNIIFYIDEVPVREVKRSEEMGGDYPSKPMSLYTTIWDASNWATSGGKYKVNYKYAPFVSEFKDLVIDGCPVDPIQQVPAGACSDHHAQLEAGDYAVITPARRLAMRRFRERYMYYSYCYDTLRYPVTPPECVIIPSERQRFQETGRLRFGGSHRPRRSRRGSRSSTPVDKSEQADMR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1095 347 MobiDBLite consensus disorder prediction 315 347 - -
Mibi12g1095 347 MobiDBLite consensus disorder prediction 332 347 - -
Mibi12g1095 347 Gene3D - 24 301 - -
Mibi12g1095 347 PIRSF EndGlu_transf 5 306 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mibi12g1095 347 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 30 231 IPR000757 GO:0004553|GO:0005975
Mibi12g1095 347 CDD GH16_XET 35 301 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mibi12g1095 347 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 266 301 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mibi12g1095 347 Pfam Glycosyl hydrolases family 16 41 223 IPR000757 GO:0004553|GO:0005975
Mibi12g1095 347 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 35 301 IPR044791 GO:0004553
Mibi12g1095 347 ProSitePatterns Glycosyl hydrolases family 16 active sites. 116 126 IPR008263 GO:0004553|GO:0005975
Mibi12g1095 347 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 303 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1095 Mibi-ChrMibi12 26190409 26193802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1095 18 323 Glycoside Hydrolase AT1G32170 71.569 4.00e-169 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1095 12 26190409 26193802 Mibi12g1095 12 26190409 26193802 ECH