Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1050 ATGAAGATCCATCAAACTAGGTTTTCAGATTCTGTTCTTGACGGTGTACCCTTTCGCGGCGCTTCAACGATTTCAGAAAATCCGGTTTCAAATTCAGCTTTAACTGCGTCTTCACCGTCTTCGGATTCTGGGAATCTTGATGATCGTTCTTTGGTTCCATATATTCCAAATCAAATGGGCGATTTTGCGTCTTTATCCATTGAAGCCCAAAACGAGCGAATCAATTCGTCTTCACCTTCCAATATAGGTGTGTCTAATCCCTATTCTGCTTCCAAAACCCTAGATGAGTGTTCAGCTTCTGCGTCAGTAGGAATCTCAGCTCTTGTCGAGTCTTCACATAATTATTACGGTAGGGAAGATCGAGATGACGTGGCAGAGCCAATTCGATCGGTTAATGGTTTATCATCGTATTATTCGGCTTTATCATCTGAACATACTGGCACGCTTTTCAACGATGGGTTTAATGCTTACAGAATTATACCCTTCACGGTGGGTGCTGGGCTTGAAAATCTTGGGAACACGTGCTTCTTCAATGTTATCTTGCAATGCCTTACACATACTGTGCCACTAATTCAGGGTCTCTGTAGTATCAATCATTATGCATCTTGTGAAAGTGCTGTTGGTGGATTCTGTGTTTTGTGTGTTCTTCGTGATCACATTAGACTTTCGTTGAATTCTGGCGGAAGAATTCTCTCACCTTTGAAACTTGTTGACAACTTGAATTATTTTTCTTCTTTTTTTACGAGATACCAGCAGGAAGATGCCCATGAATTCCTGCAGTGCTTCTTAGATAAACTCGAAAGATGCTTTCTAGATTTGAAGAGCAATGGCAAAAATTGTGAACAAGTTGACAATATAGTGGAGAAAATATTTGGAGGTCGCCTCATCAGCAAACTTCAATGTTGTAATTGTGGCCACTGTTCAGACACATATGAGCCTCTCATTGACTTTAGCTTGGAGATAGATAATGTGGATAGCCTTCCAAGTGCTTTAGCGTCTTTCACTAAGGTAGAACAGATAGATGCTAAGCTTACATGTGATAGCTGCAAGGAGGAAGTATCCATGGAGAAGAGGCTTATTTTGGATCAGACGCCTTCAGTTGCAGCATTTCATTTAAAGAGATTTAAGACAGATGGGGTATATGTTGAAAAGATTGATAATCATGTGGATTTTCCTCTAGAATTGGACTTACAGCCTTATACCAATTGTAAAGAGAGCAACAATGAAGCACTGAAGTATGAACTGTATGCCATTGTTGTGCATGTTGGGTTTTCTTCTACTTCTGGCCATTACTTTTGCTTTGTTCGCACTGCACCTGACATGTGGTATAGGTTGGATGACTCCAAGGTCACTAGAGTTACAGGAGATTTTGTTCTGTCTCAGGAAGCATACATATTACTCTATGCTCGACAGGGCACACCATGGCTATCGACTATAATTGGGCCATCAATCCAATGCCTGGCCCCAAGTGTTTTTAATACTTCTCCAAAGTCAGTTTTAGACAATGTTGATGGCTTGTATCGCCCCAATCCCAGTGAGGCAGATCTTGCAAGTGGCAGTGCAAATGAATCCCTGGGACCTTCCCCGCAGATGCCTATTTATTCTAATGGAGGATTTAATGAAATGCTCAATGACTATATGGATTCTTATCTTGAAGATGGACAGGTTCAGTTTGAGTCAAATCCAGCTATTGTTAGTTCTAACAGCTCGAAAGAAGAAACCACCCATGTCCAAGTGCCATGCAATGAGGGTAATGATTCCCTGCTGTCACTTGATGAAAAATGTCCTCAGGAGGCTATTGATGATCGAGAGAATGATGTTTTCCATCCTTTAACTCCACCCAGTTCCCCAGGTCCAGATTCTATTACTCCAGATATTACTGGCCATATTCCACGGGATCATTTGAAGATGGAGAATCATGAGAGGTGTAAGAGACCAGTAAATAAGACCGTGGACAATTCTGAGAGGAAAGAAGCAATGAGATACCTTGGCAAGATGGACAAGTCGAGGAGATCAAAACTACTCAGTGCCATGGCTCCTGGGCCCTCTCATGATAGTTATTGTATCAAAAAGAGGAAGAAATTGGGTTCTCAGTGTAAGAAATCCATACCTCCTGGTGAGCGTAAGAAATCAAATTCTCTTATGTGTGCTTCAAGATAA 2160 0.4144 MKIHQTRFSDSVLDGVPFRGASTISENPVSNSALTASSPSSDSGNLDDRSLVPYIPNQMGDFASLSIEAQNERINSSSPSNIGVSNPYSASKTLDECSASASVGISALVESSHNYYGREDRDDVAEPIRSVNGLSSYYSALSSEHTGTLFNDGFNAYRIIPFTVGAGLENLGNTCFFNVILQCLTHTVPLIQGLCSINHYASCESAVGGFCVLCVLRDHIRLSLNSGGRILSPLKLVDNLNYFSSFFTRYQQEDAHEFLQCFLDKLERCFLDLKSNGKNCEQVDNIVEKIFGGRLISKLQCCNCGHCSDTYEPLIDFSLEIDNVDSLPSALASFTKVEQIDAKLTCDSCKEEVSMEKRLILDQTPSVAAFHLKRFKTDGVYVEKIDNHVDFPLELDLQPYTNCKESNNEALKYELYAIVVHVGFSSTSGHYFCFVRTAPDMWYRLDDSKVTRVTGDFVLSQEAYILLYARQGTPWLSTIIGPSIQCLAPSVFNTSPKSVLDNVDGLYRPNPSEADLASGSANESLGPSPQMPIYSNGGFNEMLNDYMDSYLEDGQVQFESNPAIVSSNSSKEETTHVQVPCNEGNDSLLSLDEKCPQEAIDDRENDVFHPLTPPSSPGPDSITPDITGHIPRDHLKMENHERCKRPVNKTVDNSERKEAMRYLGKMDKSRRSKLLSAMAPGPSHDSYCIKKRKKLGSQCKKSIPPGERKKSNSLMCASR 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1050 719 MobiDBLite consensus disorder prediction 515 529 - -
Mibi12g1050 719 FunFam Ubiquitin carboxyl-terminal hydrolase 20 162 474 - -
Mibi12g1050 719 Pfam Ubiquitin carboxyl-terminal hydrolase 167 468 IPR001394 GO:0004843|GO:0016579
Mibi12g1050 719 SUPERFAMILY Cysteine proteinases 165 470 IPR038765 -
Mibi12g1050 719 MobiDBLite consensus disorder prediction 24 47 - -
Mibi12g1050 719 MobiDBLite consensus disorder prediction 510 529 - -
Mibi12g1050 719 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 167 182 IPR018200 GO:0004843|GO:0006511
Mibi12g1050 719 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 166 471 IPR028889 -
Mibi12g1050 719 MobiDBLite consensus disorder prediction 663 719 - -
Mibi12g1050 719 Gene3D Cysteine proteinases 164 475 - -
Mibi12g1050 719 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 413 431 IPR018200 GO:0004843|GO:0006511
Mibi12g1050 719 MobiDBLite consensus disorder prediction 24 51 - -
Mibi12g1050 719 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 91 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1050 Mibi-ChrMibi12 25551661 25555015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1050 167 470 Miscellaneous Gene Families AT4G31670 36.102 1.91e-50 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1050 12 25551661 25555015 Mibi12g1050 12 25551661 25555015 ECH