Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0912 ATGAAGAGAAACACAAGCAATTCTCTGCTCTTTTTCCTCTTCTTACTGATTCTTGTCTTTTTTACCTCTTGTCTCATTTCTGTGGAAGCAAGGAAGAGTCATAACAGGAAAACAAAACCTCATAAACATCATTCTCAAAGTCCTGCCTCATCTCCAACTCAAACTCAAACCTCCACTTTTGATGTTCTGTCTTTTGGAGCCAAGGCCAATGGGATTTCTGATGATTCCAAGGCACTTTTAGAAGCATGGGAAGCAGCATGCAAAGTTGGTGGTACAGTGAAAATTCCAGCAGAACACAGATTCCTAATCAATCCCATTACTTTACAAGGCCCTTGTATGCCTCACCTTACTCTTCAGATAGATGGAACTCTAATGGCTCCTCCTGCAATATCTTCCTGGCCAAAATCCAGTTTATTTCAGTGGATAAATTTCAAAAACATCCACAGATTCACCATCCAGGGTTCTGGCACCATTGATGGCCAAGGCTTTAACTGGTGGGCATCCTCACAGATGTATCCTATTCAGAAGAAAGGATATTATTCTAAACAAATTCTAGGCATGAAACCTACTGCTGTAAGGTTTTATTGTAGTAATGATATAACAGTTCGTGATATCAAAATCATAAATAGTCCTCTATGCCATCTAAAGTTCGACAATTCAAAAGGGATCAAAGTGAATAACATTACAATATCTTCCCCAGAAAATAGCCTCAACACTGATGGCATTCACTTACAGAACTCACAGGATGCAGAGATTCACCATTCCAACATTGGAAGTGGTGATGACTGTGTATCCATCCAGACTGGTTGCTCAAATATTCATATTCACCATATGAACTGTGGTCCAGGACATGGTATAAGCATAGGAGGATTAGGAAAAGACAGAAGTGTGGCATGTGTTTCCAACATCATGGTTAACGATGTTTCAATGCAAAACACACTATATGGAGTAAGGATCAAAACATGGCAGGGTGGTCTTGGGATGGTAAAGAATGTGTCGTTCACAAGAGTGCAAGTTCAAGATGTGAAGAGTCCAATAATGATAGACCAATACTATTGTGACAAGAATGTGTGCAAGAACCAGACAGGAACAGTGGTGATTTCTGGGGTGAAGTTTGATAACATATATGGGACCTATGCATTTCAACCTATACACATAGCTTGTAGCAATTCAGTACCTTGCACTGATGTTGATCTAACTGCTATTCAGCTTAGGCCATCAATGAAGTATAGTAATGGTTTTCAACAAGCTTTGTGTTGGAACTCTTATGGGAAATCTCAAGGCTCCTTGCTACCTTCAACCATTGATTATTGCTTGAGAAGTGGTGGTGGTTATATCAAGAAGATAGCTAGGTCTCATGATAGTGTGTGTTACTAA 1377 0.3965 MKRNTSNSLLFFLFLLILVFFTSCLISVEARKSHNRKTKPHKHHSQSPASSPTQTQTSTFDVLSFGAKANGISDDSKALLEAWEAACKVGGTVKIPAEHRFLINPITLQGPCMPHLTLQIDGTLMAPPAISSWPKSSLFQWINFKNIHRFTIQGSGTIDGQGFNWWASSQMYPIQKKGYYSKQILGMKPTAVRFYCSNDITVRDIKIINSPLCHLKFDNSKGIKVNNITISSPENSLNTDGIHLQNSQDAEIHHSNIGSGDDCVSIQTGCSNIHIHHMNCGPGHGISIGGLGKDRSVACVSNIMVNDVSMQNTLYGVRIKTWQGGLGMVKNVSFTRVQVQDVKSPIMIDQYYCDKNVCKNQTGTVVISGVKFDNIYGTYAFQPIHIACSNSVPCTDVDLTAIQLRPSMKYSNGFQQALCWNSYGKSQGSLLPSTIDYCLRSGGGYIKKIARSHDSVCY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0912 458 PANTHER - 57 425 - -
Mibi12g0912 458 Gene3D - 44 441 IPR012334 -
Mibi12g0912 458 MobiDBLite consensus disorder prediction 35 56 - -
Mibi12g0912 458 Pfam Glycosyl hydrolases family 28 92 407 IPR000743 GO:0004650|GO:0005975
Mibi12g0912 458 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Mibi12g0912 458 SMART pbh1 329 350 IPR006626 -
Mibi12g0912 458 SMART pbh1 220 246 IPR006626 -
Mibi12g0912 458 SMART pbh1 300 321 IPR006626 -
Mibi12g0912 458 SMART pbh1 247 268 IPR006626 -
Mibi12g0912 458 SMART pbh1 362 388 IPR006626 -
Mibi12g0912 458 SMART pbh1 270 290 IPR006626 -
Mibi12g0912 458 SUPERFAMILY Pectin lyase-like 51 434 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0912 Mibi-ChrMibi12 23425836 23429606 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0912 1 457 Glycoside Hydrolase AT3G26610 61.017 0.0 579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0912 12 23425836 23429606 Mibi12g0912 12 23425836 23429606 ECH