Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0898 ATGTTGGGGGGCAACAATGGTAATACTGTTCTTCCTGTTTTCCTGGACAATGCTCACATGCAATATCAAGCTAATGCAGCAAATCAACTGCAGTTGTTTGGAAATTTAGCTGCTGGGTGTAGTGTTGATCCGGTTAATTATTTTGGAAATGAGCATTTAAGCTCTATGGTTCAGCCAAGCAGACAAAACAGAGAAATAGATGACATGTCCAAGCAGCAAAGGCTTCAGATTTCATTGAATTACAACTACTGTCAAGATGAACCTGATCGATCGGCAAGTATTCCAAACCTAAACCCAAATCCAAACCATGTGTCAACTGGATTGAGGTTGTCTTACGATGATGATGAGCGTAACTCATCTGTCACTTCTGCAAGTGGAAGCATGACTGGTGCTCCTCCAATCATATTATCCCTCGGTGATAATATTAGAACTGAGCTTAATAGGCAGAAGCAAGAATTGGACCAGTATATTAAACTTCAGAAGGAACAATTGTCAAAAGGGTTGAGAGATATGAAACAAAAGCACATGGCATCCCTTCTTACTGCCATTGACAAAGGCGTAAGCAAGAAGCTAAGGGAAAAAGAAGTGGAGATAGAGAACATGAACCGAAAAAACCAAGAACTATCGGAGAAAGTAAAGCAGGTAGCAATGGAAGCACAAAACTGGCAATACAGAGCAAAGTACAACGAGTCAGTTGTGAATGTTCTAAGGAACAATCTCCAGCAGGCAATCTCGCAGGGAGTTGAACAAGGGAAAGAAGGGTTTGGGGACAGTGAGGTTGATGATGCTGTTTCGGGCATCAACCCCAATAACTTGCTGAGTAGCCATGGCTTGCCGATGAAATCTGCTGCCGGAAAGCAGCAGCAAGGCTTGGAGGAGGAGCACATGATCTGCAGGGTGTGCAAGGCGAAGGAGGTTTCGATGTTGTTAATGCCTTGTAGGCACCTGTGCTTGTGTATGGACTGTGATGCTTTTGCCAATGTTTGTCCTATATGCCAAATGATGAAATCTGCTAGTGTCGAAGTGTTTCTTTCTTAA 1038 0.4306 MLGGNNGNTVLPVFLDNAHMQYQANAANQLQLFGNLAAGCSVDPVNYFGNEHLSSMVQPSRQNREIDDMSKQQRLQISLNYNYCQDEPDRSASIPNLNPNPNHVSTGLRLSYDDDERNSSVTSASGSMTGAPPIILSLGDNIRTELNRQKQELDQYIKLQKEQLSKGLRDMKQKHMASLLTAIDKGVSKKLREKEVEIENMNRKNQELSEKVKQVAMEAQNWQYRAKYNESVVNVLRNNLQQAISQGVEQGKEGFGDSEVDDAVSGINPNNLLSSHGLPMKSAAGKQQQGLEEEHMICRVCKAKEVSMLLMPCRHLCLCMDCDAFANVCPICQMMKSASVEVFLS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0898 345 PIRSF SBP1_RNase_bind 1 345 IPR017066 -
Mibi12g0898 345 Coils Coil 143 163 - -
Mibi12g0898 345 Pfam Zinc finger, C3HC4 type (RING finger) 296 334 - -
Mibi12g0898 345 MobiDBLite consensus disorder prediction 88 108 - -
Mibi12g0898 345 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 280 344 - -
Mibi12g0898 345 MobiDBLite consensus disorder prediction 88 107 - -
Mibi12g0898 345 ProSiteProfiles Zinc finger RING-type profile. 298 333 IPR001841 -
Mibi12g0898 345 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 56 342 IPR017066 -
Mibi12g0898 345 Coils Coil 191 218 - -
Mibi12g0898 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 345 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0898 Mibi-ChrMibi12 23179419 23181398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0898 280 345 Miscellaneous Gene Families AT4G39050 36.364 2.30e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0898 12 23179419 23181398 Mibi12g0898 12 23179419 23181398 ECH