Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0853 ATGGCGGATTCCGCCTCTTCTCCCGCAATCTCAGAATCCAACCCTCACAAACCTGACTCCACCACTCCCAATTCTCACCAAACCCAACCCGATCCACTTCATCACTCCCTACCTCCACCTTCATCCTCCACACCCCTCGGAACACTAAACCCTAGCTCAAATCCACCGGTACTGCCTCCGCCGCCGCCGCCGCCGCCTTCGGTTGTCTCGGGCGGAGTCGTGGCGGCGCCTCCGGTGGTGCCGTCGTTCAGGCCGGTGGTGGCTCCTCAGTTTTCTACGATGGCTAACCCTATGAATTATCAAAATCCTAATCATGGTGGTGGTGTTCCGCCTCCTGGTGTTAGCTCTGGTGGTGGTGTTCAGCCAATGATGATTCCTTATCAGATTCCTCCTCCTGGTCAGCCTGGTAATCCCGCTATGAGGCCGTTTGTGCCGATGCCTAATGGTTATACTACACCTATTCCTCAAGGGACCATGCCTCCACCGGGAATGCCTCGTTACCCACCTCCTTATGGAACTATGGTTCGTCCTCCATTTCCTCCACGCCCACCTGGAGCTGTGAATGTGCTTCCATCTGTATCACGTCCTCCTGTTGCAGGGATCCCTCCTGTTCGCCCTGTCATTCCCCCTGTGGTTAGACCGGTGGTTGCTCCTAGTATTACACCGGCTGATAAACCACAAACTACAGTTTATATTGGAAAGATTGCATCAACAGTGGAAAATGAATTTATGCTTTCACTACTTCAGTTATGTGGACCTATCAAGAGTTGGAAACGGCCTCAAAATCCAACTAGTGGTACTCCTTTAAGCTTTGGGTTTTGGGAGTTCGAGTCTGCTGAAGGTGTCCTCCGTGCATTGCGTCTGCTCAATAAATTGAATATCGATGGGCAAGAATTAACGGTCAATCCTAATGACGCTACAAAAGAATATCTGGAGAAGTATGTTAAAAAGAAAATTGAGAACTTGCAAAAGGATGCTCAGGCTGTCGGATCTGAGAAAGATGGTGAGAGTGCCCAACCTTCGAATGCAAAAGAGGATGGAAAGCCTGATGATTCAAAGAAAGAGGACAGTAAATCAGAGAACAAGGAAAATCTTAATGTGACAAATCTCAGTATCATTAGTGATGAAGACAGGGAAGCCGATAGAGTGGCCGTAGAAAAGATTACAAACATGATAGAAGAGAGACTGAAGACAAGACCCTTACCTCCACCTCCTGCACAGGCAGCTCCTGATGGCCCTGCAAACTCCGAACAACCTTCAAAAGCAAGAGATGGAGACTCTGATGCAGATACAGTGAATAATGAAGCAGGTGATGATAAAAATGACAAGGAGACAAATGGTGAGAACAAAGCAACCAATGAACATGATAAGGCTGAGACCCCCCCTGATAGAAGGCATGATAGAAGGAGCAGAGAAAGAGACCGAGATAGAGAACTAAAACGAGAGAAGGATAGGGAGCTTGAAAGATATGAAAGAGAAGCAGAGCGGGAACGCATTAGGAAAGAGAGGGAACAAAAGAGGAGGATTGAGGAGGCTGAGCGCCAGTATGAAGCTTACTTGAAGGATTGGGAGTATAGAGAAAGAGAGAAGGAGAAAGAACGTCAATATGAAAAGGAGAAGGAGAAAGAACGGGAGCGCAAACGTAGAAAGGAGATGCTTTATGATGAAGATGATGAGGATGATGATTCAAGGAAGAGGTGGCGCAGAAGTGTGTTAGATGAGAAACGAAAGAAAAGATTGCGTGAAAAGGAAGAGGACCTGGCCGACAGACAAAAGGAAGAGGAAGAAATTGCTGAGGCCAAAAAGAGGGCTGAGGAGGATCAACAGCTGAAGCAGCAGAGAGATGCACTGAGGCTATTTTCTGAGCATGTGAATGGTGGTGAAAAAAGTATGGCTATTGAGGATATTGCCAAAATTAATACTGAACAAGACACTGTAGCAGGCCATGGTTATGAAGGTCATACAGGTGATGGTAATCCACTAAATGGCGTCATTGATGAATCGACCATGGCGTCAGTTGCTGTTTCTGATGCACGACAGAGTGGTAATGCCCCTGCTAAGAAGTTGGGTTTTGGTTTGGTTGGTTCTGGGAAAAGAACTACCGTTCCTTCTGTCTTCCATGAAGAGGAGGAGGATGATGCACACAAGGATAAAAAGATGAGGCCTCTGGTTCCAATTGATTACTCAACTGAAGAACTGCAGGCCGTTCACCCAACTGCTTCTGGGGCCCCTCCTGCAAATTTGGCTGCAGCCGCAGAATTTGCTAAGCGTTTATCCAATGCCAATATCAAGGAAGATAAGGTAGATGGAGAGTGGGATAGAAGTAGGCGTTCTAGTGAGAAATCTAACTACCGAGATAGGGACAAGAATGATGAAGACGGTTTTCACAACAAAGATGAAAGCAGGGAAAAGATTTCTGATCGTGAAAGGGATCGTGGGTTGGAGAAATTGAAGACGTCAGATAACAAAAAGCTATTAGATGCAAAACAGTTGATTGATATGATACCAAAGACCAAAGATGAGCTCTTCTCGTATGAGATAAACTGGGCAGTGTATGATAAGCACCAGCTGCATGAAAGAATGAGACCGTGGATATCAAAGAAGATCACTGAGTTCTTGGGGGAAGAAGAAACGACATTGGTAGATTACATAGTTTCAAGTACGCAGGAACATGTGAAAGCATCCCAGATGCTGGAGCTGCTTCAATCCATTTTAGATGAAGAAGCTGAAATGTTCGTTCTCAAGATGTGGAGGATGCTTATTTTTGAAATAAAGAAGGTAGAGACAGGCCTTGCCTTGAGGTCAAAATCTTGA 2814 0.4613 MADSASSPAISESNPHKPDSTTPNSHQTQPDPLHHSLPPPSSSTPLGTLNPSSNPPVLPPPPPPPPSVVSGGVVAAPPVVPSFRPVVAPQFSTMANPMNYQNPNHGGGVPPPGVSSGGGVQPMMIPYQIPPPGQPGNPAMRPFVPMPNGYTTPIPQGTMPPPGMPRYPPPYGTMVRPPFPPRPPGAVNVLPSVSRPPVAGIPPVRPVIPPVVRPVVAPSITPADKPQTTVYIGKIASTVENEFMLSLLQLCGPIKSWKRPQNPTSGTPLSFGFWEFESAEGVLRALRLLNKLNIDGQELTVNPNDATKEYLEKYVKKKIENLQKDAQAVGSEKDGESAQPSNAKEDGKPDDSKKEDSKSENKENLNVTNLSIISDEDREADRVAVEKITNMIEERLKTRPLPPPPAQAAPDGPANSEQPSKARDGDSDADTVNNEAGDDKNDKETNGENKATNEHDKAETPPDRRHDRRSRERDRDRELKREKDRELERYEREAERERIRKEREQKRRIEEAERQYEAYLKDWEYREREKEKERQYEKEKEKERERKRRKEMLYDEDDEDDDSRKRWRRSVLDEKRKKRLREKEEDLADRQKEEEEIAEAKKRAEEDQQLKQQRDALRLFSEHVNGGEKSMAIEDIAKINTEQDTVAGHGYEGHTGDGNPLNGVIDESTMASVAVSDARQSGNAPAKKLGFGLVGSGKRTTVPSVFHEEEEDDAHKDKKMRPLVPIDYSTEELQAVHPTASGAPPANLAAAAEFAKRLSNANIKEDKVDGEWDRSRRSSEKSNYRDRDKNDEDGFHNKDESREKISDRERDRGLEKLKTSDNKKLLDAKQLIDMIPKTKDELFSYEINWAVYDKHQLHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLALRSKS 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0853 937 MobiDBLite consensus disorder prediction 52 66 - -
Mibi12g0853 937 Coils Coil 525 553 - -
Mibi12g0853 937 SMART rrm1_1 229 302 IPR000504 GO:0003723
Mibi12g0853 937 FunFam RNA Binding Motif protein homolog 816 932 - -
Mibi12g0853 937 Coils Coil 574 610 - -
Mibi12g0853 937 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 228 306 IPR000504 GO:0003723
Mibi12g0853 937 Pfam PWI domain 860 923 IPR002483 GO:0006397
Mibi12g0853 937 Coils Coil 473 522 - -
Mibi12g0853 937 MobiDBLite consensus disorder prediction 578 610 - -
Mibi12g0853 937 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 230 299 IPR000504 GO:0003723
Mibi12g0853 937 MobiDBLite consensus disorder prediction 527 565 - -
Mibi12g0853 937 SMART pwi_2 853 926 IPR002483 GO:0006397
Mibi12g0853 937 MobiDBLite consensus disorder prediction 338 362 - -
Mibi12g0853 937 MobiDBLite consensus disorder prediction 421 513 - -
Mibi12g0853 937 ProSiteProfiles PWI domain profile. 840 937 IPR002483 GO:0006397
Mibi12g0853 937 MobiDBLite consensus disorder prediction 676 744 - -
Mibi12g0853 937 Gene3D - 221 337 IPR012677 -
Mibi12g0853 937 MobiDBLite consensus disorder prediction 1 32 - -
Mibi12g0853 937 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 937 - -
Mibi12g0853 937 MobiDBLite consensus disorder prediction 326 381 - -
Mibi12g0853 937 MobiDBLite consensus disorder prediction 703 725 - -
Mibi12g0853 937 CDD RRM_RBM25 228 311 IPR034268 -
Mibi12g0853 937 Gene3D PWI domain 816 932 - -
Mibi12g0853 937 SUPERFAMILY RNA-binding domain, RBD 201 306 IPR035979 GO:0003676
Mibi12g0853 937 MobiDBLite consensus disorder prediction 1 66 - -
Mibi12g0853 937 SUPERFAMILY PWI domain 858 925 IPR036483 GO:0006397
Mibi12g0853 937 MobiDBLite consensus disorder prediction 393 513 - -
Mibi12g0853 937 MobiDBLite consensus disorder prediction 766 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0853 Mibi-ChrMibi12 22414380 22421325 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0853 12 22414380 22421325 Mibi12g0853 12 22414380 22421325 ECH