LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi12g0350	ATGGCTTCTCACTCTCATCCCTTTTCTCTCTTCGTCTCTCTCTTCCTTCTTGTTTCTCTCACATGTGGAGTATTAGTAGGAGCTTCTTCTTCTTCTCCCAATGGCACAAAAATAGGCCAAGGCTATCGCTTAATCTCCATTGAAGAGACCCCAGATGGTGGCCTCATAGGTCACCTTCAGGTCAAGAAGAAGAACAATATCTACGGCCCTGATATCCCTCTTTTGCAGCTCTTTGTCAAGCATGAGACTGATAATCGTTTGAGGGTACACATAACCGATGCTGAGAAGCAGAGATGGGAGGTGCCGTACAATATTTTGCCTAGAGAGCAGCCTCCAGCCCTGAAGCAAACGATTGGAAGGTCAAGGAAGAATCCTATAACAGTTTCTGAATACGCAGGTTCTGAGCTTATTTTCAGCTACACTGCAGATCCATTCAGCTTTGCAGTGAAAAGAAAATCTAATGGACAGGTTCTCTTTGATTCAAGCTGGGATGGATCAGATGCTTTTGGTCCAATGGTGTTCAAGGATCAATACCTTGAGATTTCAACCAAATTACCCAAAGATGCTTCATTGTATGGCTTGGGGGAGAATACTCAGCCACATGGGATTAAACTTTACCCCAATGATCCATACACTTTGTACACTACTGATATTTCAGCCATTAATCTTAATGCTGATTTGTATGGATCACACCCAGTGTATATGGATCTTAGAAATGTCGGTGGTGAGCCTTTTGCACATGCTGTTTTGTTGCTGAATAGCAATGGGATGGATGTGTTTTACAGGGGAACTTCTTTGACATATAAGGTTATTGGAGGTGTTTTCGATTTTTACTTCTTTTCAGGTCCTTCTCCTCTGAATGTTGTTGATCAGTACACTTCCTTAATTGGAAGACCAGCTCCAATGCCTTACTGGTCATTTGGATTTCACCAATGCAGATGGGGTTACCATAACCTATCCGTTATAGAAGATGTTGTTGATAGTTACAACAAGGCTCAAATCCCACTTGATGTGATCTGGAACGATGATGATCACATGGATGGGAAAAAGGACTTCACAGTTAACCCTGTCAACTACCCTCGTCCAAAGCTTTTAGCCTTCCTAGACAAAATACACCGCATTGGTATGCATTACATAGTCATTGTTGATCCAGGAATTGCTGTGAATGCCAGTTATGGTGTCTACCAGAGGGGCATGGCTAATGATGTTTTTATCAAGTATGATGGTGATCCCTTCATGGCCCAAGTTTGGCCCGGGGCAGTACATTTTCCTGATTTCCTTAATCCCAAAACAGTTTCTTGGTGGGGTGATGAGATCCGCCGATTCCATGAACTACTTCCTGTTGATGGCTTATGGATTGACATGAATGAAGTTTCAAACTTCTGTTCAGGAAAGTGCACAATTCCCAAGGGCAAGCAGTGCCCCACTGGAACTGGACCTGGATGGATCTGTTGCCTAGATTGCAAAAACATAACCAAGACAAGATGGGATGACCCACCCTACAAGATAAATGCTTCAGGAATCCAAGCTCCCATAGGCTACAAAACCATAGCCACTAGTGCAGTCCACTACAATGGTGTTTTGGAGTATGATGCTCACAGCATTTATGGTTTCTCCCAAACAATTGCTACACACAAGGGGCTTCTAGGGCTTCAGGGGAAACGACCTTTTATCCTGACCCGGTCTACTTATGTCGGTTCAGGCAAATATGCTGCTCATTGGACAGGTGACAACAAGGGCACATGGGAGGACTTGAGGTACTCCATATCTACAATGCTCAACTTTGGCATTTTTGGGGTTCCAATGGTTGGTTCAGATATATGCGGCTTCTACCCTGCTCCAACTGAAGAACTTTGCAACCGTTGGATCGAAGTAGGTGCTTTCTACCCATTCTCAAGGGATCATGCAAATTACTACTCCCCAAGACAAGAGCTTTACCAGTGGGAATCAGTCGCCGAGTCTGCTCGCAACGCCTTGGGTATGAGATACAAGCTCCTCCCTTACCTCTACACTTTGAACTATGAGGCTCATATCAGTGGAGCCCCAATAGCCAGGCCACTTTTCTTCTCGTTTCCTACCTACACAGCATGTTATGGCACCAGCACCCAGTTCTTGCTAGGTAAAGGTCTCATGATCTCTCCTGTGTTGGAGCAAGGAAAAACACAAGTGAATGCCCTCTTCCCTCCTGGCACCTGGTACAGTTTGCCCGACCCGACATCATTCATTGCATCAAAGAACGGAGTCAATGTCAACCTTGATGCCCCGCTGCATGTGGTCAATGTCCATTTGTATCAGAACATCATTCTCCCCATGCAACAAGGAGGATTGCTTTCCAAGCAAGCGAGAATGACACCATTCACACTCATGGTGACCTTCCCGGCCGGTGCCACCGATGGAGAAGCTCAAGGGAACCTTTACCTTGATGAAGATGACCTGCCAGAGATGAAGCTAGGAAATGGCTATTCGACATATGTCGATTTCTATGCAAGTTTAAAACAGGGAAGTGTGAAGATTTGGTCACAAGTCCAAGAGGGGAAGTATGCTTTGGACAAAGGCTGGATTATTGAGAGGATATCTGTATTGGGATTAAGAGGAGGTGCTGCACCATCTTCAATTAAACTTGATGGTGCACCTTTGGTGGGAGGATCTGATATGGAGATTCGTACATCAGAACAGAAATCAGGTCAGAAGTATTCACCACAGGGACAAGAAGACTATGAGCAGAAGGCAACAATGGTGGATGTGAATGGCTTGAAAATCCCTGTGGGTAAAAATTTTGCAATGACCTGGAAAATGGGGGTTTCTCATTGA	2811	0.4479	MASHSHPFSLFVSLFLLVSLTCGVLVGASSSSPNGTKIGQGYRLISIEETPDGGLIGHLQVKKKNNIYGPDIPLLQLFVKHETDNRLRVHITDAEKQRWEVPYNILPREQPPALKQTIGRSRKNPITVSEYAGSELIFSYTADPFSFAVKRKSNGQVLFDSSWDGSDAFGPMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDISAINLNADLYGSHPVYMDLRNVGGEPFAHAVLLLNSNGMDVFYRGTSLTYKVIGGVFDFYFFSGPSPLNVVDQYTSLIGRPAPMPYWSFGFHQCRWGYHNLSVIEDVVDSYNKAQIPLDVIWNDDDHMDGKKDFTVNPVNYPRPKLLAFLDKIHRIGMHYIVIVDPGIAVNASYGVYQRGMANDVFIKYDGDPFMAQVWPGAVHFPDFLNPKTVSWWGDEIRRFHELLPVDGLWIDMNEVSNFCSGKCTIPKGKQCPTGTGPGWICCLDCKNITKTRWDDPPYKINASGIQAPIGYKTIATSAVHYNGVLEYDAHSIYGFSQTIATHKGLLGLQGKRPFILTRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHISGAPIARPLFFSFPTYTACYGTSTQFLLGKGLMISPVLEQGKTQVNALFPPGTWYSLPDPTSFIASKNGVNVNLDAPLHVVNVHLYQNIILPMQQGGLLSKQARMTPFTLMVTFPAGATDGEAQGNLYLDEDDLPEMKLGNGYSTYVDFYASLKQGSVKIWSQVQEGKYALDKGWIIERISVLGLRGGAAPSSIKLDGAPLVGGSDMEIRTSEQKSGQKYSPQGQEDYEQKATMVDVNGLKIPVGKNFAMTWKMGVSH	936

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi12g0350	936	CDD	GH31_MGAM_SI_GAA	297	677	-	-
	Mibi12g0350	936	SUPERFAMILY	Glycosyl hydrolase domain	682	762	-	-
	Mibi12g0350	936	FunFam	Alpha-glucosidase 1	665	765	-	-
	Mibi12g0350	936	SUPERFAMILY	(Trans)glycosidases	288	680	IPR017853	-
	Mibi12g0350	936	Gene3D	-	767	935	IPR013780	-
	Mibi12g0350	936	PANTHER	ALPHA-GLUCOSIDASE	59	895	-	-
	Mibi12g0350	936	Pfam	Glycosyl hydrolases family 31	278	768	IPR000322	GO:0004553\|GO:0005975
	Mibi12g0350	936	Gene3D	glycosyl hydrolase (family 31)	35	298	-	-
	Mibi12g0350	936	FunFam	Alpha-glucosidase 1	35	298	-	-
	Mibi12g0350	936	FunFam	Maltase-glucoamylase, intestinal	299	664	-	-
	Mibi12g0350	936	Pfam	N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase	55	187	IPR031727	-
	Mibi12g0350	936	Gene3D	Glycosidases	299	664	-	-
	Mibi12g0350	936	Pfam	Galactose mutarotase-like	189	257	IPR025887	-
	Mibi12g0350	936	Gene3D	-	665	764	IPR013780	-
	Mibi12g0350	936	SUPERFAMILY	Galactose mutarotase-like	38	285	IPR011013	GO:0003824\|GO:0005975\|GO:0030246
	Mibi12g0350	936	ProSitePatterns	Glycosyl hydrolases family 31 active site.	450	457	IPR030458	-
	Mibi12g0350	936	CDD	GH31_N	179	297	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi12g0350	Mibi-ChrMibi12	7360303	7364717	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi12g0350	38	935	Glycoside Hydrolase	AT1G68560	75.724	0.0	1466

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi12g0350	12	7360303	7364717	Mibi12g0350	12	7360303	7364717	ECH