Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0277 ATGGCTGCATCTTCTTCTCTTGCGGCCACCACCAACATCATGCTCGCAATCTTCGAGAAAAAAACCAATCCAATCGATCTCTACCGTCCTCTCCGCAACTACGTCGCTTTCCACTACTCCGAACGCGAGGCTCAGAACATCGAAGACGACCTCCAAACCCTCAAACAACTTCGTTCAGACCTCGAACGTCACTCCGATCCTTCCCTAACCTCTCGCCGTGACCTTCTTCAATCCTATTACAAATCTCTCTGCCTCGTAGAAACCCGTTTCCCCATATCTCCCGACCCAGATCACGTCAACACTCTCACCTTCCTTTGGTTTGATGCTTTCAAGCCGAAATTGAAGGCCACACAGCAGAATATTCACCTTGAAAAAGCTGCTGTTTTGTTCAATTTGGGTGCTGTTTATAGTCAAATTGGGTTGTCTTATGATAGGAATACTGTTGATGGAAGGAGGCAGGCTTCACATGCGTTTATTGCAGCTGCTGGGTCTTTTGCTTACTTGAGGGATAATGCGGCTATGAAGGTTTCAATTGGGGGTTCCACTACTGTGGATTTGTCTGTTGAGTGTTCTGGGATGTTGGAGAGGTTGATGCTGGCTCAAGCACAAGAGTGTGTGTTTGAGAATACAATTGCAAAAGGGAGTACCCCTGGGGTTTGTGCAAAGATCTCTAGGCAGGCTGGGCTATACTATGAGGAAGCTTTAGCTGCATTGAACGTTGCACCTCTAAATCAGCATTTTGACAAGTCTTGGTTAGCTCATGTGCAGCTAAAGGCAGCTCTATTCTTTGGAGAAGCTTGCTATAGATATGGATTAGAGCTACATGAGAAAGAAGAGATAGCAGAGGAGATTGCGAGACTGAGGAGTGGGATTAGTGCACTGACTGAAGCAAAGAAAAGCTCAAAGGGTGCCCCAGCACAAATCCTAGATGCAATTAGTAAGTTGGAGGCCAATCTTAACCGTAATCTTGAAAGGGCTATTAAAGAGAATGATAGAGTTTACCTCATGAGGGTTCCTTCTCCCAGCACCTTAGCACCTCTTCCTGCATTTTCCATGGTGAAGCCAATGGCAATGAATGAAGTGTTGGATGCAAGTAAAGAGAAAATGTTTGCAAGTCTTGTTCCTGATAGCAGTGCAAAATCACTCTCCAGATACACTGAGATGGTAGATGAAATTATAAGATCCCAGGCTGAAAAGTTGCAACAGGCCAGCGAGTTAACCCGAATAAGGCTAAAGGAAATGGAGCTTCCTGATTCTATTCTTGCTTTGGAAGGAAATTTAACTCTACCAACACATCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGTCCTGCTGGTTTGGAAACAGAGTTAGTGCAACTTAAGGATCTAAGGAGGGTGAATCAAGAAATGTTGGTCCAGACAGAGGAGCTGTTACAGAAGGAGGCAAGAGAAGATGCCCAATTCAGAAGCCAATTTGGGACAAAGTGGACCAGGCCTCAATCAAGCACTTTAACAAAAAACTTGCAGGATAGATTAAATAGATTTGCGGGTAACTTGAAGCAAGCTGCAGAAAGTGATGGTCGGATTGAGCGTGCAGTTAGAGAACACACTGCACTTATGTCTATCCTTGACAGCCGTCCGATTGAATCTGCACTCCCTTCCTTGGCAAGGCCCATAATGTCTCTAGATGCCAATGAAGATGCTATTGTAGGGTCCCTCAAGCAGAGCTTGAGGCAACTTGAAACCCTGGGAGCTCAAAGGGCTGGCCTTGAAGACATGCTTAAAGAGATGAGAAGAAAGGATGATATACTACCCAAGCTGATGACGTCAACTGGTTCTCATGAGGATCTTTTCAAGAAAGAGATAACAAAATATGACCATATATGTGAAGAAATAGCTCAAAACATCGATGCACAAGAGCAGTTGTTGCTGCAGATTCAGGATCAAAATGATGAGTTCTCTGCTATATTCAATCTTGAAGATTACAAGGCTTCACGTGAAAGATGCTACAAGCAGATTGAAGCTGCCATAGCAAAGTATCGTGAAATAAAAGACAACATCAACGAAGGGTTGAAATTTTATGTTACACTGCAGGATGCAATCACAAATGTAAAGCAGCAGTGCAGTGACTTTATAATGACCAGAAACATCCAGTGCAGGGAAATGATTGAAGATGTCCAGAGACAAGTGGCTGGTCTCAGTTTCCAGGATAACAAAACCACTGCCCCCAGTAACAGTGGCTACCCTTCTATGGGACACCAATCTCAAAGATCCTATCCACCAGATTCTCGCCCGCAACCCGGATATTATCAGCCACCACCACTTGAACAGCCATCAGCAGCAGGGTACGCCCAACCCTCTCCATATGGTTCTGCACATCAGCCGCCTTCTCCATACCACATACCGCACCCATCAGCTGCTCCATATCCTCCTCAAGGCCCTCATCAGCAACCAGCAGGCCATGACTATGGCCAACCTGCATATCCTGGATGGCGTGGCCCGTACTATAATGCACATTCTCAACAACCTTCCTCTGCTCCTCGGCCTCCTTATACCATTCCTGGTCCATATCCCCCTCATCAAAGTGGCTATTATAAGCAACAATAG 2595 0.4555 MAASSSLAATTNIMLAIFEKKTNPIDLYRPLRNYVAFHYSEREAQNIEDDLQTLKQLRSDLERHSDPSLTSRRDLLQSYYKSLCLVETRFPISPDPDHVNTLTFLWFDAFKPKLKATQQNIHLEKAAVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAYLRDNAAMKVSIGGSTTVDLSVECSGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQAGLYYEEALAALNVAPLNQHFDKSWLAHVQLKAALFFGEACYRYGLELHEKEEIAEEIARLRSGISALTEAKKSSKGAPAQILDAISKLEANLNRNLERAIKENDRVYLMRVPSPSTLAPLPAFSMVKPMAMNEVLDASKEKMFASLVPDSSAKSLSRYTEMVDEIIRSQAEKLQQASELTRIRLKEMELPDSILALEGNLTLPTHLKEDVEAVQISGGPAGLETELVQLKDLRRVNQEMLVQTEELLQKEAREDAQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDGRIERAVREHTALMSILDSRPIESALPSLARPIMSLDANEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMRRKDDILPKLMTSTGSHEDLFKKEITKYDHICEEIAQNIDAQEQLLLQIQDQNDEFSAIFNLEDYKASRERCYKQIEAAIAKYREIKDNINEGLKFYVTLQDAITNVKQQCSDFIMTRNIQCREMIEDVQRQVAGLSFQDNKTTAPSNSGYPSMGHQSQRSYPPDSRPQPGYYQPPPLEQPSAAGYAQPSPYGSAHQPPSPYHIPHPSAAPYPPQGPHQQPAGHDYGQPAYPGWRGPYYNAHSQQPSSAPRPPYTIPGPYPPHQSGYYKQQ 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0277 864 Coils Coil 456 476 - -
Mibi12g0277 864 Gene3D alix/aip1 like domains 8 374 IPR038499 -
Mibi12g0277 864 Coils Coil 625 645 - -
Mibi12g0277 864 ProSiteProfiles BRO1 domain profile. 12 407 IPR004328 -
Mibi12g0277 864 Pfam BRO1-like domain 14 393 IPR004328 -
Mibi12g0277 864 Coils Coil 309 329 - -
Mibi12g0277 864 Gene3D alix/aip1 in complex with the ypdl late domain 375 653 - -
Mibi12g0277 864 Coils Coil 576 596 - -
Mibi12g0277 864 Gene3D alix/aip1 like domains 421 702 - -
Mibi12g0277 864 CDD BRO1_Alix_like_1 14 369 - -
Mibi12g0277 864 CDD V_Alix_like_1 375 711 - -
Mibi12g0277 864 Coils Coil 277 297 - -
Mibi12g0277 864 Coils Coil 44 64 - -
Mibi12g0277 864 Pfam ALIX V-shaped domain binding to HIV 429 713 IPR025304 GO:0005515
Mibi12g0277 864 PANTHER PCD6 INTERACTING PROTEIN-RELATED 13 856 IPR045251 -
Mibi12g0277 864 MobiDBLite consensus disorder prediction 730 864 - -
Mibi12g0277 864 MobiDBLite consensus disorder prediction 787 811 - -
Mibi12g0277 864 SMART BRO1_2 13 397 IPR004328 -
Mibi12g0277 864 MobiDBLite consensus disorder prediction 730 758 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0277 12 6122185 6130361 Mibi12g0277 12 6122185 6130361 ECH