Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1372 ATGCCAAAGAGTGAGGGCTGCTGTTCTACTCAGCTCATTGATGGAGACGGCACATTCAATGTTGAAGGAATGGAAAGGTTTATGAAGGAAGTCAAATTGGGCGAATGTGGGCTTTCCTATGCTGTAGTTTCCATTATGGGTCCACAAAGTAGTGGTAAGAGCACGCTATTGAATAAATTGTTTAGAACCGACTTCAATGAGATGGATGCTTTCAAAGGAAGGTCTCAAACAACTAAAGGAATTTGGATGGCAAAATGTACAGGCATAGAGCCTTTCACACTTGTGATGGATTTGGAGGGTACTGATGGAAGAGAACGTGGAGAGGATGATACAGCATTTGAAAAGCAGAGTGCGCTTTTTGCTCTGGCTGTTTCAGATATAGTGCTAATAAACATGTGGTGTCACGACATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTATTGAAAACTGTCTTTCAAGTTATGATGAGATTGTTTAGCCCACGCAAAACAACATTGCTGTTTGTGATTCGTGATAAGACAAGAACACCCCTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGATTCTGTTCCTAAGCCACAAGCCCATTTGGAAACTCCATTAAGTGATTTTTTTAATGTTGAAGTTGTTGCTCTTTCTAGTTTTGAAGAAAAGGAAGAGCAATTTAAGGAGCAGGTTGTCAACTTGAGGCAACGATTCCATCATTCTATCGCTCCCGGCGGGCTTGCAGGAGATCGACGTGGAGTAGTTCCTGCTTCAGGCTTTTCTTTCAGTGCACAGCAAATTTGGAAGGTCATTAAGGAGAACAAGGATCTGGACCTTCCTGCTCATAAGGTCATGGTTGCTACTGTAAGATGTGAAGAAATCGCCAATGAGAAGTATGCTGCTTTCACTACAAATGAGGAGTGGCAAGAATTGGAAGAGGCTGTGACATCTGGTCCGGTTACTGGATTTGGCAAGAGGCTCAGTTTAGTCCTTGGCTCTTGTCTGTCAGAGTATGATTTAGAAGCCACTTATTTTGATGAAAGTGTCAGAACTGCAAAACAAAAGCAGCTTCAAGATAAGTTGTTGCAACTTGTCCAACCAGCATTCCAAACTGTGCTGGGACATGTAAGGTCTGGAATTATGGAAAAGTACAAGGAAGCTCTTGACAAGGCTTTGAAAGGAGGGGAAAGGTTTTCTGCTACTGCTAATAGATGCACGATGTCTTTTATGGCTCAGTTTGATGAAGCATGTACAGATGTAGTAATTGAACAAGCAAACTGGGATGCATCTAAGGCAAGGGAGAAACTTCAGCGTGATATCGATGCACATGTTGCTTCTGTTCGTGCAGCTAAGCTTTCTGAACTTACTTCATCATATGAGGAAAAATTAAAAGATGCTTTATCTGGACCTATTGATGCCCTTATGGATGAAGCAAATAGTGATACATGGCCAGCAATAAGGAATCTTCTCAAGCGTGAGACTGAATCCGCCGTATCAAGTTTCTCTTCTGCACTTTCTGGGTTTGATATGGATGAAGAAACAAGAAGGAACATGATTACAGGTCTAGAGGATTACGCAAGAGGTGTAGTAGAAGCAAAGGCTAGGGAAGAATCTGGAAGAGTTCTTATCCATATGAAGGACAGGTTTACAACATTGTTTAGCCATGATTCTGATTCGATGCCTCGTATTTGGAACGGGAAGGAAGATATTCGTGCCATCACCAAGAGTGCCCGCTCTGCTTGCTTGAAGTTGCTATCAGTTATGACGGCTATTCGTTTAGATGCCACTGCTGATAATATTGAGAAAACATTAGCTGTTGCATTGATGGATCCTCCAACTTCTGTAAAAGATAAAAGCACCGTAACAGTTGATCCTTTAGCTTCAAGCTCCTGGCCAGAGATTCCATCTTCTAAAACATTGATCACCCCAGTTCAGTGCAAAAATGTGTGGAGACAATTCAAGACAGAGACTGAATTCAGTGTCACTCAGGCCATTTCTTCACAGGAGGCCCACAAACGTAGTAACAACTGGTTACCACCTCCATGGGCAATTGTTGCTTTATTTATTCTGGGATTCAATGAATTTATGACACTTCTAAGAAACCCCTTGTATTTTGGTGTCATCTTTATTGGTTTTCTTCTGGTAAAAGCCATATGGGTGCAGCTGAACATCTCCAATGAATTCAGCCATGGAATGCTTCCAGGAATGATATCCTTGTCTACCAAGTTTCTTCCAACAGTGTTGGGCATTATCAGAAAACTAGCAGAGCAGGCACATAGTCCTGCAACTAACAATAATCCTCAGAGAAACTCATCTAGAACCAATCAACATTCTGTTACTTCAAGTAGTAACACAGAGTCCAGTGCTTCATCTTCATCTAATGTAACTTCTTTGGACAAAGGACCCAAACATGAATAG 2421 0.4168 MPKSEGCCSTQLIDGDGTFNVEGMERFMKEVKLGECGLSYAVVSIMGPQSSGKSTLLNKLFRTDFNEMDAFKGRSQTTKGIWMAKCTGIEPFTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHLETPLSDFFNVEVVALSSFEEKEEQFKEQVVNLRQRFHHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFTTNEEWQELEEAVTSGPVTGFGKRLSLVLGSCLSEYDLEATYFDESVRTAKQKQLQDKLLQLVQPAFQTVLGHVRSGIMEKYKEALDKALKGGERFSATANRCTMSFMAQFDEACTDVVIEQANWDASKAREKLQRDIDAHVASVRAAKLSELTSSYEEKLKDALSGPIDALMDEANSDTWPAIRNLLKRETESAVSSFSSALSGFDMDEETRRNMITGLEDYARGVVEAKAREESGRVLIHMKDRFTTLFSHDSDSMPRIWNGKEDIRAITKSARSACLKLLSVMTAIRLDATADNIEKTLAVALMDPPTSVKDKSTVTVDPLASSSWPEIPSSKTLITPVQCKNVWRQFKTETEFSVTQAISSQEAHKRSNNWLPPPWAIVALFILGFNEFMTLLRNPLYFGVIFIGFLLVKAIWVQLNISNEFSHGMLPGMISLSTKFLPTVLGIIRKLAEQAHSPATNNNPQRNSSRTNQHSVTSSSNTESSASSSSNVTSLDKGPKHE 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1372 806 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Mibi11g1372 806 PANTHER PROTEIN SEY1 5 786 IPR008803 -
Mibi11g1372 806 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Mibi11g1372 806 MobiDBLite consensus disorder prediction 760 806 - -
Mibi11g1372 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 276 IPR027417 -
Mibi11g1372 806 MobiDBLite consensus disorder prediction 760 799 - -
Mibi11g1372 806 Gene3D - 12 249 IPR027417 -
Mibi11g1372 806 Hamap Protein SEY1 [SEY1]. 9 767 IPR008803 -
Mibi11g1372 806 CDD GBP 36 219 - -
Mibi11g1372 806 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Mibi11g1372 806 Pfam Sey1 three-helix bundle domain 323 758 IPR046758 -
Mibi11g1372 806 Coils Coil 218 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1372 Mibi-ChrMibi11 32769539 32779371 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1372 11 32769539 32779371 Mibi04g0539 04 10588662 10593994 CCT