Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1292 ATGACCACGAGGCTCGATTCCTCAAGATTTGTTACTTGGGAAACACGGCAGCTTCAATCTGATCTTGAAAGCGAGCTGTCAGAGTATTCAGAAGTCATTACTCAAAAGTTGGCTTTAGTGGGTAATGCCATGCTGCTTTCAATAATGTTTTCTCCTAGCAAATTGATTCTGAAAACGAGCAAGAATTTGATGCTGCCACTGAAGAATGCCTCCTTAAAGTCACTAAGAAAGCAACCTCAGCTAAACCCTCCATCAATGCATCAATGCTCACTTGCTTGGGATTATCCGTGTCAGAACATTCTTGATGAGGAAAAAGAAGGAATAGGGGCAGAGATGTACAGAGAAAGAAATGACAAGGACCACTCAGCATCCCCACCTCCAAATCCAGCATCCCCCACTAAAACCTTCTACATTATATCTGTCTCTTTTAAGCCTCACCTTCCTCCCCTTCTCATCTCTTTCTCTCTCATGGCTTCTCGCAGACAAATTGCTGCCATGAAACAATCCCTCTTTGATCAGGGATATCTCGATGAACAGTTCATTCAACTTGAGGAGCTTCAAGATGATGCCAACCCAAACTTTGTTGAAGAAATTGTCACACTTTATTACCGAGATTCCTCTAGACTTATAGCAAACATAGAGCAAGCATTGGAGAGAAACCCACTGGACTTTAACAGGCTAGACTCTATGATGCATCAGTTCAAAGGAAGCAGCTCAAGCATCGGAGCCCAAAAGGTGAAAGCAGAATGCACTCTGTTTAGGGAATATTGCAGGGCTGGAAATGCTGATGGATGCAAGAGAAGCTTCCAACAACTCAAGAGAGAATATGCCACACTGAGAAAGAAGCTTGAAGCTTATTTTCAGCAAGCAAGGCAAGCTGGGCCCTTTGAGGCAGCATGTCGCTCCAAAAGGAAATTTTCACTGCCAGCCTTTTTTCGCTGCTGCTTGACGCTTGGTACTTGTGTACTAACTCAAGAAGATCGATTTATTGACAGCATGAATTACCTTCTTGGAGCTTTCAAGCCAGCGTGTAACATCTTAATCACATTCAATGATGGGAAAAGTCGAAAGCAGGTTCCATTTAAAAAAGAGAATGGCCAAACAGTCACTGCCCCACTGTTCCAAAGTCAAGAAAACATTGCTGGGAAGATTATAGTCGAGCCAATGCAAGGGAAAAAGATTGACCACAATGGCATAAAAGTCGAATTACTCGGACAAATAGAGATGTATTTTGACAGAGGAAACTTTTATGACTTTACTTCCCTTGTACGAGAACTAGATGTCCCTGGAGATATTTATGAGAAGAAAACTTATCCATTTGAGTTTTCCACTGTTGAAATGCCATATGAGACATATAATGGGGTAAATGTCAGGCTGAGGTATGTTTTGAAAGTGACCATCAGTCGTGGTTATGCAGGAAGCATAATAGAGTACCAGGATTTTGTGGTCCGCAACTATACTCCACCTCCATCAATTAACAATAGCATCAAGATGGAAGTTGGAATTGAAGATTGCCTACACATTGAATTTGAATACAACAAAAGCAAGTATCATCTGAAAGATGTCATCATTGGCAAGATATATTTTCTCCTTGTAAGAATCAAGATAAAGAATATGGACCTTGAGATTAGGCGTCGGGAATCAACAGGCTCAGGGACTAACACCCATGTTGAGACAGAAACATTGGCGAAATTTGAGTTGATGGACGGTGCTCCTGTCCGAGGTGAGTCGATACCTATCAGACTGTTTCTCAGCCCCTACGAGCTGACACCAACTCATCGCAACATTAACAACAAATTCAGTGTGAAATACTTCTTAAATCTGGTGTTGGTCGATGAAGAGGACAGGCGTTACTTTAAGCAGCAAGAAATCACAATGTATAGGCTGCAAGAAGAAACTTCCTGA 1905 0.4189 MTTRLDSSRFVTWETRQLQSDLESELSEYSEVITQKLALVGNAMLLSIMFSPSKLILKTSKNLMLPLKNASLKSLRKQPQLNPPSMHQCSLAWDYPCQNILDEEKEGIGAEMYRERNDKDHSASPPPNPASPTKTFYIISVSFKPHLPPLLISFSLMASRRQIAAMKQSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLIANIEQALERNPLDFNRLDSMMHQFKGSSSSIGAQKVKAECTLFREYCRAGNADGCKRSFQQLKREYATLRKKLEAYFQQARQAGPFEAACRSKRKFSLPAFFRCCLTLGTCVLTQEDRFIDSMNYLLGAFKPACNILITFNDGKSRKQVPFKKENGQTVTAPLFQSQENIAGKIIVEPMQGKKIDHNGIKVELLGQIEMYFDRGNFYDFTSLVRELDVPGDIYEKKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTISRGYAGSIIEYQDFVVRNYTPPPSINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGTNTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYFLNLVLVDEEDRRYFKQQEITMYRLQEETS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1292 634 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 160 292 IPR036641 GO:0000160
Mibi11g1292 634 Gene3D HPT domain 152 299 IPR036641 GO:0000160
Mibi11g1292 634 Coils Coil 262 289 - -
Mibi11g1292 634 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 191 286 IPR008207 GO:0000160
Mibi11g1292 634 FunFam Histidine-containing phosphotransfer protein 4 155 298 - -
Mibi11g1292 634 CDD HPT 195 277 IPR008207 GO:0000160
Mibi11g1292 634 Pfam Vacuolar protein sorting-associated protein 26 340 615 IPR028934 GO:0006886
Mibi11g1292 634 Gene3D - 489 634 IPR014752 -
Mibi11g1292 634 FunFam vacuolar protein sorting-associated protein 26A 333 487 - -
Mibi11g1292 634 Gene3D - 331 487 IPR014752 -
Mibi11g1292 634 FunFam Vacuolar protein sorting-associated protein 26 489 634 - -
Mibi11g1292 634 Pfam Hpt domain 197 280 IPR008207 GO:0000160
Mibi11g1292 634 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 333 631 IPR028934 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1292 Mibi-ChrMibi11 30668384 30685249 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1292 11 30668384 30685249 Mibi04g0598 04 11669911 11670986 CCT
Mibi04g0598 04 11669911 11670986 Mibi11g1292 11 30668384 30685249 ECH
Mibi11g1292 11 30668384 30685249 Mibi11g1292 11 30668384 30685249 ECH