Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1197 ATGGACCTCATTTCAGGCCTCCCTCACGACGTGGCTCTCGATTGTTTGGTTCGAATTTCCTACCACCAATTCCCCGCCGTCGCCTCCGTCTGCAAAGCCTGGCGAACCGAAATCCACTCGCCTGAATTTCTCCGCCGCAGGAAAATCTCCGGTCACCTCCAGAAAATCATCGTCATGGTCCAAGCCAAAGCCGAACCGGGAAACCCCGGTTCGACCGTTGTCAAAGGATCCACCAAACCGGTCTACCGTCTCACTATCTTCGAACCCAAAACCGGCCTCTGGTCCGAGATGCCTCCGATTCCTGGCTTCTCTGATGGGTTACCAATGTTCTGTCAAATCGCCGGCGTCGGATTGGATCTGGTTGTGATGGGCGGCTGGGATCCTGCCACGTGGAAGGCCTCCGATTCTGTGTTTGTGTATAACTTCATGACCGGGAAGTGGCGGCGTGGGGCCGACATGCCCGGTGGGCCCAGGACATTCTTCGGCTGCGACTCCGACCGCAGGAGATTCGTCTACGTGGCAGGCGGCCACAGCGAGGATAAGAACGCGCTGACGTCGGCGCTCGCGTATGACGTGGCGAACGACACGTGGGCCCCACTGCCTGACATGGCGAAAGAGCGTGACGAGTGCAAGGCGGTTTTCCACGACGGTAAGGTTAGGGTGATCGGTGGCTACTGTACGGACATGCAGGGGAGGTTTGAGAGGACTGCGGAGGTTTTTGACGTTGCCACGTGGAAGTGGGGCCCGGTGGAGGAGGGGTTCCTGGATGCGGCCATGTGTCCGAGGACGTGCGTGTACGGTGGGGATGAGAGGGTGTACAGGATTGGTGGTGGTGGTGAGGTGATGGTGAGGATGGGTGACACGTGGCGGGTGCTGGTGGATCTGGGAGATGAGATGATGAACGTTGTGTTTGTGATGCCTTTTGATGGGAAGATGCTGTTGATTGGAACGAGGGTGCACGGTGAGCCCCACGTGGGAATTGTAGTGGACTTGGAAAGTGGTAACCGTAGGAAATTGGATATCCCTCAGAACTTCACAGGCTACGTTCAGTCCGGTTGTCTTCTAGAAATTTAA 1074 0.5698 MDLISGLPHDVALDCLVRISYHQFPAVASVCKAWRTEIHSPEFLRRRKISGHLQKIIVMVQAKAEPGNPGSTVVKGSTKPVYRLTIFEPKTGLWSEMPPIPGFSDGLPMFCQIAGVGLDLVVMGGWDPATWKASDSVFVYNFMTGKWRRGADMPGGPRTFFGCDSDRRRFVYVAGGHSEDKNALTSALAYDVANDTWAPLPDMAKERDECKAVFHDGKVRVIGGYCTDMQGRFERTAEVFDVATWKWGPVEEGFLDAAMCPRTCVYGGDERVYRIGGGGEVMVRMGDTWRVLVDLGDEMMNVVFVMPFDGKMLLIGTRVHGEPHVGIVVDLESGNRRKLDIPQNFTGYVQSGCLLEI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1197 357 PANTHER OS02G0208700 PROTEIN 2 357 IPR044595 GO:0080037|GO:2000762
Mibi11g1197 357 Gene3D - 48 322 IPR015915 GO:0005515
Mibi11g1197 357 SUPERFAMILY Kelch motif 80 320 IPR015915 GO:0005515
Mibi11g1197 357 Pfam Kelch motif 171 203 IPR006652 GO:0005515
Mibi11g1197 357 Pfam Kelch motif 114 154 IPR006652 GO:0005515
Mibi11g1197 357 SMART kelc_smart 119 167 IPR006652 GO:0005515
Mibi11g1197 357 SMART kelc_smart 170 217 IPR006652 GO:0005515
Mibi11g1197 357 SUPERFAMILY F-box domain 1 47 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1197 Mibi-ChrMibi11 29364040 29365113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1197 4 200 EF-hand Containing Proteins AT4G39560 25.253 6.16e-08 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1197 11 29364040 29365113 Mibi04g0733 04 14974645 14976870 CCT
Mibi11g1197 11 29364040 29365113 Mibi11g1197 11 29364040 29365113 ECH