Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g2011 ATGGGAAGTCACAGGTGGAAAGGGCATCAGCTTTTGTCAGAATATGATGATATCGTCTTAGATCGATGCGCTTCCAATAGCCCTCCCCTTCCGCCCACACCATTTCCTCATAATAGCCCTGCCTTCATTCAACATCCTGTCTCCAAAATGGACACTCTCGCCGGAATCGCAATCAAGTACGGCGTTCAGGTGTCAGACATCAAAAAATTGAATGGCCTTGTTACAGACCTTCAGATGTTTGCTCTTAAAACTCTCAACATCCCACCAGGGGGAAGACACCCTGCATCAGATGATTCCACTACTACAGGAAACAGAACTCTAGATGAACTGTTCGATTTGCAACATTCTTTGACAATGAATTCTCCCCAGCGAAAGGCCTCCCCTGCTGGGAACTCTTTACAAGGTTTCTATAGAATAAATCCAACGGATAAGAAAGCCATATCCGATGACTTTCATATAGCAGGGAACAGAAATGGGACTTCTAATTTCTCCGAAGAATCGGCTTGGACCCATCAATCTCTGAGTCCTCTCCGAAAATCTAGAAGTCTAGTTGATATCATTTTGAGTGAGATTGAGGAACAGCCTGGTACTGCGCCCAGCACACCGGAGACACTTTTGAAGGAGGATATTAGCAGCAGCTGTGGGTTCCCATCAAGAACTGGAAGAGGTTTGGCCCTCAGGCAGAAATCAGCAAGCCGAGCTTCATTGACCATAGATTCAGAACCTGGTGGCTCAAATTCTGGGCCAACTGGTATGGAGGATATATTCCGAACTGATGGTCCCCTTGGTGTTAAGAAATCATCGAGCACAACGTGCTTACATGACGAAGGTAGTAGCCCCACACCTATCTGGCCAACCTCAAAATGGAGTTTGGCACCAGATTTTCAGGCTTTTGCATCTGCCAAACCAATGTTTGATGGCTTGCCCAAACCCACTACTGGTCGCAGAAATAAAGCTGCATTTGATAAACATATATAG 978 0.4591 MGSHRWKGHQLLSEYDDIVLDRCASNSPPLPPTPFPHNSPAFIQHPVSKMDTLAGIAIKYGVQVSDIKKLNGLVTDLQMFALKTLNIPPGGRHPASDDSTTTGNRTLDELFDLQHSLTMNSPQRKASPAGNSLQGFYRINPTDKKAISDDFHIAGNRNGTSNFSEESAWTHQSLSPLRKSRSLVDIILSEIEEQPGTAPSTPETLLKEDISSSCGFPSRTGRGLALRQKSASRASLTIDSEPGGSNSGPTGMEDIFRTDGPLGVKKSSSTTCLHDEGSSPTPIWPTSKWSLAPDFQAFASAKPMFDGLPKPTTGRRNKAAFDKHI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g2011 325 Pfam LysM domain 47 87 IPR018392 -
Mibi10g2011 325 MobiDBLite consensus disorder prediction 303 325 - -
Mibi10g2011 325 ProSiteProfiles LysM domain profile. 43 87 IPR018392 -
Mibi10g2011 325 SMART LysM_2 44 88 IPR018392 -
Mibi10g2011 325 MobiDBLite consensus disorder prediction 230 247 - -
Mibi10g2011 325 CDD LysM 47 87 IPR018392 -
Mibi10g2011 325 Gene3D LysM domain 36 101 IPR036779 -
Mibi10g2011 325 SUPERFAMILY LysM domain 43 88 IPR036779 -
Mibi10g2011 325 MobiDBLite consensus disorder prediction 229 251 - -
Mibi10g2011 325 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 28 249 IPR045030 -
Mibi10g2011 325 MobiDBLite consensus disorder prediction 266 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g2011 Mibi-ChrMibi10 43252541 43254984 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g2011 10 43252541 43254984 Mibi10g2011 10 43252541 43254984 ECH