Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1877 ATGACGAGCTTGATCGGGCTAATCAACAAGATTCAAAGGGCTTGTACAGTTTTAGGTGACCATGGCGGCGAGGGATTGTCCCTCTGGGAGGCTCTTCCCTCCGTCGCGGTGGTCGGAGGCCAGAGTTCAGGGAAATCGTCTGTGTTGGAAAGTGTGGTCGGAAGGGATTTTCTGCCTCGGGGATCTGGCATTGTCACAAGAAGGCCACTAGTGCTTCAGCTTCATAAGACTGAAGATGGGCAACAAGAGTATGCTGAGTTTCTCCATGCACCAAGAAAGAGATTCACTGACTTTGCTGCTGTGAGGAAGGAAATATCAGATGAAACAGATCGTATAACTGGGAAGACAAAGCAAATATCAAATGTTCCAATTCAACTCAGCATATATTCTCCAAATGTTGTTAACTTAACCCTCATAGATCTTCCTGGATTGACGAAGGTTGCAGTAGAGGGACAATCAGAAACTATAGTCGAAGATATTGAAAACATGGTCCGTTCCTATGTTGAGAAGCCAAACTGCATCATATTGGCTATTTCTCCAGCAAACCAAGATATTGCCACATCAGATGCTATAAAACTTGCTAAAGAAGTCGATCCTTCAGGTGAAAGAACATTCGGGGTGTTGACAAAACTGGATCTTATGGATAAAGGAACCAATGCCGTTGATGTACTTGAAGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTCAATCGTTCACAAGCTGATATTAATAAAAATGTCGACATGATTGTTGCTCGTAGGAAGGAACGTGAGTATTTCGAGACAAGCCCTGAATATGGACATCTCGCTCCTAAAATGGGCTCAGAATATCTTGCCAAGCTTTTATCTCAGCATTTGGAGATTGTTATTAGGCAGAAGATTCCCAGTATCATTGCCTTAATAAATAAGACCATTGATGAGCTTAATGCGGAGTTAGACCGTATTGGCAGGCCTATTGCTGTAGATTCTGGGGCCCAACTATACACGATTTTAGAGATGTGTCGTGCATTTGACAAAGTATTTAGAGAACACCTTGAAGGAGGGCGACCTGGTGGGGATCGGATAAATGGAGTTTTTGACCACCAATTGCCAGCTGCTTTGAAAAAGCTTCCATTAGATCGTCACCTAACCTTAAATAATATACAGAGAGTTGTTACTGAAGCTGATGGATATCAACCTCATCTGATTGCTCCAGAGCAAGGGTACAGAAGACTTATTGAAGGATCTATCGGCTACTTCAAAGGCCCCGCTGAAGCTTCTGTGGATGCTGTTCACTTCATTCTAAAGGAACTTGTACGGAAGTCGATTTCAGAAACTGAGGAATTGAAAAGATTTCCAACCCTTCAGTCTGATATAGCTGCTTCTGCTAATGATTCATTGGAAAGATTTCGAGATGAAAGCAGGAAGACAGTTCAACGGCTGGTTGAGATGGAGGCTGGTTATCTGACAGTTGAGTTCTTTCGGAAGATTAATGATGACGTGAATCGAACTGGTCCAAATGCAGAAAAGGAGAAGGAAAAGGAAAAGAGAAAGGACAAGGTCATGGACAATTTCTCAGACAATCACCTTAGGAAGATAGCATCAAATGTTAGCTCGTACATCCAAATGGTTCTTGATACACTAAAGAATTCGATACCAAAGGCTGTGGTTTATTGTCAAGTTAGAGAGGCTAGGAGATCATTACTTAACCAGTTTTATGTCCAAGTTGGGAAGAGAGAGAAGGAGCAATTGAGTGCCATGTTGGATGAAGATCCAGTGCTTATGGAGAAGAGAGTACAAATTGCCAAAAGGCTTGAATTGTACAAGCAAGCCAGGGATGATATTGACGCTGTGGCTTGGAAATGA 1854 0.4277 MTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQQEYAEFLHAPRKRFTDFAAVRKEISDETDRITGKTKQISNVPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQSETIVEDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARRKEREYFETSPEYGHLAPKMGSEYLAKLLSQHLEIVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFREHLEGGRPGGDRINGVFDHQLPAALKKLPLDRHLTLNNIQRVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHFILKELVRKSISETEELKRFPTLQSDIAASANDSLERFRDESRKTVQRLVEMEAGYLTVEFFRKINDDVNRTGPNAEKEKEKEKRKDKVMDNFSDNHLRKIASNVSSYIQMVLDTLKNSIPKAVVYCQVREARRSLLNQFYVQVGKREKEQLSAMLDEDPVLMEKRVQIAKRLELYKQARDDIDAVAWK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1877 617 SMART GED_2 521 614 IPR003130 GO:0003924|GO:0005525
Mibi10g1877 617 Pfam Dynamin GTPase effector domain 524 614 IPR003130 GO:0003924|GO:0005525
Mibi10g1877 617 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 58 67 IPR019762 -
Mibi10g1877 617 Gene3D Dynamin, middle domain 331 594 - -
Mibi10g1877 617 ProSiteProfiles GED domain profile. 526 617 IPR020850 -
Mibi10g1877 617 CDD DLP_1 32 298 IPR001401 GO:0003924|GO:0005525
Mibi10g1877 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 306 IPR027417 -
Mibi10g1877 617 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 29 298 IPR030381 GO:0005525
Mibi10g1877 617 PRINTS Dynamin signature 32 50 IPR022812 -
Mibi10g1877 617 PRINTS Dynamin signature 222 241 IPR022812 -
Mibi10g1877 617 PRINTS Dynamin signature 180 198 IPR022812 -
Mibi10g1877 617 PRINTS Dynamin signature 199 215 IPR022812 -
Mibi10g1877 617 PRINTS Dynamin signature 130 147 IPR022812 -
Mibi10g1877 617 PRINTS Dynamin signature 57 74 IPR022812 -
Mibi10g1877 617 Gene3D - 1 307 IPR027417 -
Mibi10g1877 617 Pfam Dynamin central region 219 486 IPR000375 -
Mibi10g1877 617 SMART dynamin_3 1 249 IPR001401 GO:0003924|GO:0005525
Mibi10g1877 617 FunFam dynamin-related protein 1E 1 307 - -
Mibi10g1877 617 Pfam Dynamin family 35 210 IPR045063 -
Mibi10g1877 617 PANTHER DYNAMIN 3 614 IPR022812 -
Mibi10g1877 617 FunFam Dynamin-related protein 1C 329 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1877 Mibi-ChrMibi10 41857722 41864155 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1877 10 41857722 41864155 Mibi10g1877 10 41857722 41864155 ECH