Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1873 ATGGCCGATGCTCTTACTGTAATTCCTGCTGCTGTGCTCCGCAATCTTGCTGACAAGCTCTATGAGAAGCGAAAGAATGCTGCTCTTGAGGTTGAGGGGGTTGTGAAGCAGCTTGCAGTTGCTGGGGATCATGACAAAATCACGGCAGTAATCAATTTGTTGATTACGGAATATACTTTCTCGCCGCAAGCAAATCAACGGAAGGGAGGATTGATAGGACTGGCTGCGGCGACCGTTGGGTTGTCTAATGAAGCCTCTCAGCATCTTGAGCAAATCGTGCCTCCTGTATTAAAGTCCTTCTGTGATCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTGTACAACATTGCTAAGGTTGTGAGAGGGGAATTTATTGTATTCTTCAATCAGATCTTTGATGCTTTATGCAAGCTTTCCGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTCCTGGATCGTCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTTAGTATTGAAGAATTTATACCACTGTTGAGGGAGCGTATGAATGTCCTGAATCCGTATGTTCGTCAGTTTTTGGTTGGATGGATTACTGTGTTGGACAGTGTCCCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTAGATGGTTTGTTTAATATGTTGAGTGATTCTAGTCATGAAATACGTCAGCAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAGAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATACTGGTTCAGAGGGCAGGATCTCCAGATGAATTTACTAGATTAACAGCTATCACATGGATAAACGAGTTTGTCAAACTTGGTGGAGATCAGCTTGTTCCATATTATGCTGACATTCTCGGCGCCATTCTGCCTTGCATATCCGATAAAGAAGAAAAAATTCGAGTGGTTGCTCGTGAAACCAATGAAGAACTACGGGCAATCAGGGCTGACCCAGCAGAAGCTTTTGATGTAGGAGCAATCCTGTCTGTTGCTAGGAGACAATTGTCAAGTGAATATGAAGCTACTCGAATTGAAGCTCTGCACTGGATATCAACTCTTTTAAACAGATATCGTGCTGAGGTCTTGACCTTTCTGGATGACATATTTGACACCTTACTGAAAGCACTTTCGGATCCATCCAATGAGGTTGTGCTTCTGGTTCTTGATGTTCATGCATGCATTGCAGAGGATCCTCACCACTTTCGAAAGCTTGTTGTTTTCCTAGTGCACAACTTCCAAATTGATAATTCTCTTTTGGAGAGGCGTGGTGCTTTGATAATCCGTCGGCTTTGTGTGCTTTTGAATGCTGAAAGAGTCTACCGTGAACTATCTACGATACTAGAAGGGGAATCTGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTAAATTTGATCTTACTCACTTCGTCGGAATTATCTGAGCTTCGAGATCTTTTGAAGCAATCGCTAATAAATCCTGCTGGGAAGGATCTCTTTGTTTCCTTGTACGCCTCATGGTGCCATTCTCCAATGGCAATTATTAGTCTCTGTTTAGTAGCTCAGACATACCAACATGCAAGTGCTGTGATTCGATCTCTTGTAGAGGAGGACATTAATGTGAAATTTTTGGTTCAACTGGATAAGTTGGTTCGCTTGCTGGAAACTCCAATCTTTGCTTATCTTAGATTGCAGCTTCTTGAACCTGGAAAGCATGTATGGTTATTTAAAGCATTGTACGGTCTTCTGATGCTGCTTCCTCAGCAAAGTGCCGCCTTCAAGATACTGAAAACTCGTTTAAAAGCCGTGCCATCATATTCTTTCAATGGTGAACAATTGAATAGAATATCATCTGAGAATCCTTGCCAGATTCTTCATCATATGTCTGGATCTCAGGCTTTTGAGGATGGCGATATGACCTCCGATGGTGGGAAGTCACATGATGGAATCGATTTTGCTGCAAGGCTGCAACAGTTTGAGAAAATGCAGTACCAGCATCGCTTGCATGCTAAAGCACAAGCCTGGTTGCGCCATAATTCCACGTCATTCTCAAAGGAGGGTTCCCAATCACAGAGACAGGAAGATGTGAAGCAATCTCAGTCATCTGACATTAATGCTCCTCCTTTAAGATCATCAAAGAAAGGCTCCGGGCAGCAGCAACTATAA 2181 0.426 MADALTVIPAAVLRNLADKLYEKRKNAALEVEGVVKQLAVAGDHDKITAVINLLITEYTFSPQANQRKGGLIGLAAATVGLSNEASQHLEQIVPPVLKSFCDQDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIRADPAEAFDVGAILSVARRQLSSEYEATRIEALHWISTLLNRYRAEVLTFLDDIFDTLLKALSDPSNEVVLLVLDVHACIAEDPHHFRKLVVFLVHNFQIDNSLLERRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSELRDLLKQSLINPAGKDLFVSLYASWCHSPMAIISLCLVAQTYQHASAVIRSLVEEDINVKFLVQLDKLVRLLETPIFAYLRLQLLEPGKHVWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLNRISSENPCQILHHMSGSQAFEDGDMTSDGGKSHDGIDFAARLQQFEKMQYQHRLHAKAQAWLRHNSTSFSKEGSQSQRQEDVKQSQSSDINAPPLRSSKKGSGQQQL 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1873 726 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Mibi10g1873 726 FunFam ARM repeat superfamily protein 6 125 - -
Mibi10g1873 726 FunFam protein VAC14 homolog 126 248 - -
Mibi10g1873 726 Gene3D - 2 248 IPR011989 -
Mibi10g1873 726 MobiDBLite consensus disorder prediction 685 726 - -
Mibi10g1873 726 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Mibi10g1873 726 PANTHER TAX1 BINDING PROTEIN-RELATED 7 686 IPR026825 GO:0006661|GO:0070772
Mibi10g1873 726 FunFam protein VAC14 homolog isoform X1 249 410 - -
Mibi10g1873 726 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Mibi10g1873 726 Gene3D - 249 408 IPR011989 -
Mibi10g1873 726 SUPERFAMILY ARM repeat 5 526 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1873 Mibi-ChrMibi10 41812318 41819721 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1873 10 41812318 41819721 Mibi10g1873 10 41812318 41819721 ECH