Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1343 ATGGAGACAGAGAGATCAAATCCCAGTGACGTCCTTTCTTTAGCTTTCAAACCCATTTGCTCAAATGGGCCATACTTTGGGACCCCAATCTCAGTCACAACCCAGAATATGGCATTTTTGAGGCAAAAGTTTCTATTTTCAGCTCTAGCTTCAATCCTCTGCTTTGCCATTGAGGTATCGTCACGTAGCAGGGTTTATACGCCCCCAAGTGTCACACCTTTGACTAGTTCTTTTCCTCGTGTACCAATTGATCGTGGGTTTTCTAAGTCTTTTGGGGCCTCAAATATTCAGTATCTCAGTAATGGGTCCATGGCCACTCTGGCTCTTGACAAAAATTCAGGCTCTGGTTTAGTCTCAAATGATAGACACTACTATGGATTCTTCAGTGCAGCTATCAAACTACCATCCGGTCTTTCATCTGGTGTTGTAGTGGCCTTCTATTTGTCAAATGCAGATAAGTTCCCTCACAACCATGATGAGATAGATATTGAGCTTCTGGGGCATGAAAGAAGAAATGATTGGGTTATTCAAACCAATTTGTATGCAAATGGAAGTGTAAGCACTGGAAGAGAAGAGAAGTTCTATCTTTGGTTTGACCCCACAAAGCAGCATCATTACTACAGTATCTTATGGAACAGCTACCACACAGTGTTTTTAGTGGACAATATTCCAGTGAGAGAGTTCATCCACAGCAATTCATATCCTTCTATATACCCATCAAAGCCAATGTCAGTATATGCAACAATATGGGATGCATCAGATTGGGCAACACATGGAGGAAAATACCCAGTGAATTATAAGTATGCTCCATTTGTTGCTTCTTTCACTGAAATGGAATTAAGTGGTTGTGTGGTTTCAAATCCTTCAGAAACATCATCATCACCAACACCACCATCAGCTTCTTCTTACACATGCTCAAAGTCTTCTTCTTCAAGTCCTTCAAGCTTGGACCCTGCCAATGGACCTGAGTTTTCTAAGCTATCTCAACAGCAAATTGCAGCCATGGATTGGGCAAGAAGGAAGCTCATGTTTTACTCTTACTGTAATGATAAACCAAGGTACAAAGTCATGCCTCCAGAATGCCACTGA 1089 0.416 METERSNPSDVLSLAFKPICSNGPYFGTPISVTTQNMAFLRQKFLFSALASILCFAIEVSSRSRVYTPPSVTPLTSSFPRVPIDRGFSKSFGASNIQYLSNGSMATLALDKNSGSGLVSNDRHYYGFFSAAIKLPSGLSSGVVVAFYLSNADKFPHNHDEIDIELLGHERRNDWVIQTNLYANGSVSTGREEKFYLWFDPTKQHHYYSILWNSYHTVFLVDNIPVREFIHSNSYPSIYPSKPMSVYATIWDASDWATHGGKYPVNYKYAPFVASFTEMELSGCVVSNPSETSSSPTPPSASSYTCSKSSSSSPSSLDPANGPEFSKLSQQQIAAMDWARRKLMFYSYCNDKPRYKVMPPECH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1343 362 Pfam Glycosyl hydrolases family 16 87 267 IPR000757 GO:0004553|GO:0005975
Mibi10g1343 362 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 74 275 IPR000757 GO:0004553|GO:0005975
Mibi10g1343 362 MobiDBLite consensus disorder prediction 286 323 - -
Mibi10g1343 362 SUPERFAMILY Concanavalin A-like lectins/glucanases 88 361 IPR013320 -
Mibi10g1343 362 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 325 361 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mibi10g1343 362 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 77 361 IPR044791 GO:0004553
Mibi10g1343 362 Gene3D - 66 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1343 Mibi-ChrMibi10 33998801 34001796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1343 47 362 Glycoside Hydrolase AT1G10550 62.975 2.12e-147 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1343 10 33998801 34001796 Mibi10g1343 10 33998801 34001796 ECH