Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1294 ATGAAACTCCATTTCTCCTTCTTCCTCATCGTCTTCCTCCTCTCTGTCTCTTCCTCCTTCCCGCCAATTTCAGCACGATTTTTCCCCAATATATCCTCAATCCCTCCGTGGCTTTCCCAAAATACCCCTCCGGGAGCATGGGACGCCTTCCGCAACCTCACAGGCTGCCACCGTGGAAACACCTACGACGGCCTAGCAAAAATCAAGAAATACTTCAACTACTTCGGTTACATCCCTAATTCCCCTTCCAATTTCACCGACGACTTCGACGATTCCCTCGAATCCGCCATTAAAACCTACCAGAAAAACTTCAACCTCAACATCACCGGCGAGCTAGATCCTAACACTCTCAACCAGATCGTCCGCCCTCGCTGCGGCGTCGCCGACATCATCAACGGCACCAGCACCATGAACTCCGGCAAGGAGAATAATTCCGCCGCTACCACAGATTTACACTTCCACTCTGTCTCTCACTACACCTTCTTCCCCGGCACACCTCGCTGGCCCGCCGGTACTGAAACTCTCACCTACTCCTTCTTGCCCGCCAACGGACTCACCGATGAGGTGAAGTCGGTGTTTGCGGGTGCGTTCAAGCGGTGGTCGGAGGTGACGACGGTGAGTTTTACGGAGGCGACGTCGTATCAATCGGCGGATATTAGGATTGCGTTTTATACCGGAGATCATGGAGATGGAGAGCCGTTTGATGGACCGTTAGGGACGTTGGCGCACGCGTTTTCGCCGACGAATGGGAGGTTTCATTTGGATGGATCGGAGAATTGGGTGGTTTCCGGCGATGTGACGGCGGCGACGGTGTCGACGGCGGTGGATCTGGAATCTGTGGCGGTTCATGAGATAGGGCATTTGTTAGGGTTAGGGCATTCGTCTGTGGCGGAGGCGATTATGTTCCCGACGTTATCGTCGAGGACGAAGAAGGTGGCTTTGGCGGAGGATGATATTCAGGGGATTCAAGAATTGTACGGTTCGAACCCTAATTACAATGGTTCCGCGACGGCGACGACGACGTCGAAGCAGAATGATTCTAGTCACGGTGGCCGACGATGTCTCAGTGTGGTGGAGTCAACCACGGGGATGCTGCTTTTGGTAGCCGTTGGATTAGTCCATTTGATTTTGTAG 1134 0.5335 MKLHFSFFLIVFLLSVSSSFPPISARFFPNISSIPPWLSQNTPPGAWDAFRNLTGCHRGNTYDGLAKIKKYFNYFGYIPNSPSNFTDDFDDSLESAIKTYQKNFNLNITGELDPNTLNQIVRPRCGVADIINGTSTMNSGKENNSAATTDLHFHSVSHYTFFPGTPRWPAGTETLTYSFLPANGLTDEVKSVFAGAFKRWSEVTTVSFTEATSYQSADIRIAFYTGDHGDGEPFDGPLGTLAHAFSPTNGRFHLDGSENWVVSGDVTAATVSTAVDLESVAVHEIGHLLGLGHSSVAEAIMFPTLSSRTKKVALAEDDIQGIQELYGSNPNYNGSATATTTSKQNDSSHGGRRCLSVVESTTGMLLLVAVGLVHLIL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1294 377 Gene3D Collagenase (Catalytic Domain) 53 333 IPR024079 GO:0008237
Mibi10g1294 377 CDD ZnMc_MMP 174 327 IPR033739 GO:0008237|GO:0008270
Mibi10g1294 377 MobiDBLite consensus disorder prediction 330 351 - -
Mibi10g1294 377 Pfam Matrixin 172 327 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Mibi10g1294 377 SMART col_5 164 328 IPR006026 GO:0006508|GO:0008237|GO:0008270
Mibi10g1294 377 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 160 330 - -
Mibi10g1294 377 Pfam Putative peptidoglycan binding domain 66 119 IPR002477 -
Mibi10g1294 377 SUPERFAMILY PGBD-like 55 130 IPR036365 -
Mibi10g1294 377 PANTHER MATRIX METALLOPROTEINASE 44 336 - -
Mibi10g1294 377 PRINTS Matrixin signature 217 245 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mibi10g1294 377 PRINTS Matrixin signature 120 133 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mibi10g1294 377 PRINTS Matrixin signature 193 208 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mibi10g1294 377 PRINTS Matrixin signature 314 327 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mibi10g1294 377 PRINTS Matrixin signature 280 305 IPR021190 GO:0004222|GO:0006508|GO:0008270
Mibi10g1294 377 FunFam Metalloendoproteinase 1 55 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1294 Mibi-ChrMibi10 32991266 32992570 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1294 10 32991266 32992570 Mibi10g1294 10 32991266 32992570 ECH