Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1033 ATGCCTTCCATGGCTCAAGGAGGATTCAGAAACTTCCCCGGCAATCAGAAGCCTGGTAGTAAATTATCCAATGAAAATCAGAATCGTCAAATTGACTTCCCTTCACGGAGACAGAAGATTTTACACCAAAGAAAGTCTCTTCCAATTGCTTCGGTTGAGAAAAGACTTGTTGATGAGGTCCGAAAGCATGATATTTTGATAATTGTTGGTGAGACTGGAAGTGGAAAGACCACACAGATCCCCCAATTCCTGTTCGATGCTGGCTTTTGCCATGATGGAAAAGTTATTGGGATAACTCAACCTCGGCGTGTCGCTGCTGTTACTGTGGCGAAAAGGGTTTCTGAGGAATGTGGTGTTGAATTGGGCCAAAAGGTTGGTTACTCTATTAGATTTGACGATTCTACCTCAAGTTCAACAAGGATTAAATACATGACAGATGGATTGCTTCTGAGGGAAGCATTATTGGATCCATTTCTTTCTAAGTATTCTGTTATAATTGTTGATGAAGCTCATGAGAGAACTGTCCACACTGATGTCTTGATGGGCTTGCTTAAAAATGTACAACATGCTCGTTCCAATGTTGTTTCTGATGGTCGAAGACCTAATTCTGAAAACAAGAATCTAAAGAGTGGCATGTCAATGGAGAAAGAAAATGGTGGTCAGTGTGGCAATTTTCTTAGGAAGCAAAATAATAGAAAGTATGCTCCCCTGAAGCTAATCATCATGTCTGCAAGTCTTGATGCTCAGGTGTTTTCTGAGTACTTTGGTGGTGCAAAAGCTGTTCATGTCCAAGGGAGACAATTTCCTGTCGATATATTTTATACTCGTCAAGCTGAGGCAGATTATCTAGATGCTTCCTTGATAACTATATTCCAGATTCATCTGGAGGAGGGCCCTGGTGATATACTAGTATTTCTGACTGGCCAGGAAGAGATTGAATCTATTGAAAGGCTAATAAATGAGCGACTCAAGCAATTACCTGAAAGCAGCCAGAAGCTTCTGACTGTTCCTATATTTGCAGCTCTTCCTTCTGAGCAGCAATTGCGAGTATTTGCACCAGCTCCATCTGGATTTCGCAAGGTAATATTGGCTACTAATATTGCTGAAACATCACTAACAATCCCTGGAATCAAGTATGTGGTGGATCCTGGATTTGTTAAAGCACGCACTTATGACCCTAGCAAAGGAATGGAATCGTTGGTTGTTGTTCCTACATCCAAGTCCCAGGCTCTGCAAAGGAGTGGGCGTGCAGGGCGTGAAGGACCAGGAAAATGTTTTAGGCTCTATCCAGAAAGTGAATTTGAGAAACTTGAGGACTCAACAAAGCCGGAGATTAAGCGATGCAACCTCTCCAATGTCATTTTGCAGCTTAAGGCTTTAGGTGTTGATGACATACTAGGGTTTGATTTCATTGAGAAACCTTCAAGGGCAGCTATCATCAAATCATTGGAGCAGCTATTCTTGTTAGGTGCTCTAACAGATACCTGTCAACTATCTGATCCAGTTGGAATTCAAATGGCTCGGCTTCCATTGGACCCTATTTATTCCAAAGCTCTTGTATTAGCTAGTCAGTTTAAATGCTTGGAGGAGATGCTGATAGCCGTTGCAATGCTTTCTGTGGAATCCATATTTTATGCTCCTCGTGACAGGTTAGAAGAGGCAAGGAATGCTATGAAATGCTTCTCAAGTCCAGAAGGGGACCACCTGACTTTGATTAATGTTTATCGAGCATCTAATGAGTTCCTAGAAAAGAGATTGATGGGGATGGGTAATGCAAAAGGTGAAAAGGCTCTGAGAAAGTGGTGTAAGGAAAACTTTATCAATAGCCGTTCTCTCAAGCATGCTCGCGACATTCACAAGCAAATTTCAGATAATGTTGAACAAATGGGTTTGCATATTGCTTCTTGTGGAGATGATATGCTTCCATACCGCAGATGCCTTGCTGCCTCCTTTTTCCTGAATGCAGCTGTAAAGCAGCCAGAGGGAACATACAGGGCCCTCGCAAGCGGTCAGGTGGTGCAGATCCACCCTTCTTCAGTACTATTTAAACAAAAGCCAGAGTGCATAATATTCAATGAACTGGTCCAAACTAATAACAAGTATATACGGAATATAACCAGAATTGACTATCTATGGTTGACTGAGCTGGCTCCTCAATATTATGCTGTACAGAATTAA 2178 0.4192 MPSMAQGGFRNFPGNQKPGSKLSNENQNRQIDFPSRRQKILHQRKSLPIASVEKRLVDEVRKHDILIIVGETGSGKTTQIPQFLFDAGFCHDGKVIGITQPRRVAAVTVAKRVSEECGVELGQKVGYSIRFDDSTSSSTRIKYMTDGLLLREALLDPFLSKYSVIIVDEAHERTVHTDVLMGLLKNVQHARSNVVSDGRRPNSENKNLKSGMSMEKENGGQCGNFLRKQNNRKYAPLKLIIMSASLDAQVFSEYFGGAKAVHVQGRQFPVDIFYTRQAEADYLDASLITIFQIHLEEGPGDILVFLTGQEEIESIERLINERLKQLPESSQKLLTVPIFAALPSEQQLRVFAPAPSGFRKVILATNIAETSLTIPGIKYVVDPGFVKARTYDPSKGMESLVVVPTSKSQALQRSGRAGREGPGKCFRLYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDTCQLSDPVGIQMARLPLDPIYSKALVLASQFKCLEEMLIAVAMLSVESIFYAPRDRLEEARNAMKCFSSPEGDHLTLINVYRASNEFLEKRLMGMGNAKGEKALRKWCKENFINSRSLKHARDIHKQISDNVEQMGLHIASCGDDMLPYRRCLAASFFLNAAVKQPEGTYRALASGQVVQIHPSSVLFKQKPECIIFNELVQTNNKYIRNITRIDYLWLTELAPQYYAVQN 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1033 725 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 57 264 IPR014001 -
Mibi10g1033 725 MobiDBLite consensus disorder prediction 194 221 - -
Mibi10g1033 725 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 163 172 IPR002464 -
Mibi10g1033 725 Gene3D - 468 637 - -
Mibi10g1033 725 SMART helicmild6 313 421 IPR001650 -
Mibi10g1033 725 MobiDBLite consensus disorder prediction 194 214 - -
Mibi10g1033 725 MobiDBLite consensus disorder prediction 1 27 - -
Mibi10g1033 725 CDD SF2_C_RHA 268 429 - -
Mibi10g1033 725 CDD DEXHc_DHX33 47 263 - -
Mibi10g1033 725 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 287 461 IPR001650 -
Mibi10g1033 725 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 644 720 IPR011709 -
Mibi10g1033 725 Gene3D - 11 266 IPR027417 -
Mibi10g1033 725 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 267 441 - -
Mibi10g1033 725 Pfam Helicase conserved C-terminal domain 291 420 IPR001650 -
Mibi10g1033 725 PANTHER ATP-DEPENDENT RNA HELICASE 35 713 - -
Mibi10g1033 725 SMART ultradead3 45 273 IPR014001 -
Mibi10g1033 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 611 IPR027417 -
Mibi10g1033 725 Pfam Helicase associated domain (HA2) 482 606 IPR007502 GO:0004386
Mibi10g1033 725 SMART ha2_5 481 572 IPR007502 GO:0004386
Mibi10g1033 725 Gene3D - 267 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1033 Mibi-ChrMibi10 28891776 28898739 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1033 10 28891776 28898739 Mibi10g1033 10 28891776 28898739 ECH