Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0370 ATGGCTTTAACACTTCGTTCTTCAAATTCATTCATTTCTCAAATAGAAACCCAAATTCCCAAACCTCGTGAAGATTTCTTATCTTCTTCCTCAGTTAGCTTTGCAAGGATCAAACCATCCTCCTCATCACCATCACCATCATCACTCCGTATCAGAGCAAGCCATGTCACGGTTGCTGAAACCAGCGGAAACAGGGCGGAGGAGCTACATCATATGCCATTGGTGGCTCCTCATAAGCATGATGATTCAATGAAAGTGCCAGTGTTTGTGATGATGCCATTAGACACAGTGACCATGGGAGGAACTCTGAATAAGGCAAGAGCCATGAACGCTAGTTTGATGGCCTTAAAAAATGCAGGAGTTGAAGGAGTCATGGTGGATGCTTGGTGGGGTTTAGTTGAAAAGGATGGCCCTTTGAAATATAACTGGGAAGCCTATGCTGAACTTGTTCACATGGTCCAAAAACATGGATTAAAGCTTCAAGTCGTCATGTCCTTCCATCAATGTGGAGGAAACGTAGGCGACTCATGCAGTATTCCTTTACCTCCTTGGGTGCTTGAAGAAATCAGCAAGAACCCTGACCTGGTTTACACAGACAAATCTGGGAGGAGAAATCCTGAGTATATTTCTTTAGGGTGTGATATGCTTCCTGTTCTAAGAGGAAGGACACCTCTTCAGGTGTACTCTGACTTCATGACTAGTTTCCGTGACAGATTCAGAGATTACTTGGGCAGTGTTATTCAAGAAATTCAAGTAGGAATGGGACCTTGTGGAGAACTCAGATATCCATCTTATCCAGAAAGTAATGGAACTTGGAGGTTCCCAGGAATTGGTGAATTCCAATGCTACGACAAGTACATGAGGTCGTCGTTGGAGGCAGCAGCAGAAACAATAGGAAACAGAGATTGGGGGAGAAGTGGGCCCCACGATTCAGGCCAATACAACCAATTCCCAGAAGACACCGAATTCTTCAAACGCGAAGGAACATGGAATTCCGATTACGGAACCTTCTTCCTAACATGGTACTCCAACAAATTAATCCAACACGGAGACCAAATCCTCAAATCCGCAAACCAAATCTTCAATCCCACAGGAACAAAAATCTCAGCCAAAATCGCAGGCATCCACTGGCACTACAACACAAGATCTCACGCCGCAGAATTAACCGCAGGCTACTACAACACCAGATCTCACAACGGATACGTAAAAATCGCTCAAATGTTAGCGAAACACGGAGCGATCTTGAATTTCACGTGTATGGAGATGAAGGATTGGCAGCAGCCTGGGCACGCGTGTTGTTCGCCGGAGGGATTGGTACGGCAGGTGAAGGAGACGGCGGCGACGGCGAGGGTTGAATTGGCCGGTGAGAATGCGTTGGAGAGGTATGATTGGGAAGGGTACGGACAGGTGATGGAGACAAGTAGGTCGGATTGTGGGAATGGATTGGTGTCGTTCACGTATTTGAGGATGAACAAGAGGTTGTTTGAAGAGCAAAATTGGAGGGAATTTGTGAGGTTTGTTAGGAGTATGGAGGAAGGTGGGAGGAGAGAGAGACTTCCTGATTATGTTTCCCGTGGGAGTGATTTGTATGTTGCAGACATCAGAGGGATTGACAACAAGAAGAAGAAGAAGAAGCATGTTCAGGAGGTAGCTATGGTTTGA 1662 0.4585 MALTLRSSNSFISQIETQIPKPREDFLSSSSVSFARIKPSSSSPSPSSLRIRASHVTVAETSGNRAEELHHMPLVAPHKHDDSMKVPVFVMMPLDTVTMGGTLNKARAMNASLMALKNAGVEGVMVDAWWGLVEKDGPLKYNWEAYAELVHMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDKSGRRNPEYISLGCDMLPVLRGRTPLQVYSDFMTSFRDRFRDYLGSVIQEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRSSLEAAAETIGNRDWGRSGPHDSGQYNQFPEDTEFFKREGTWNSDYGTFFLTWYSNKLIQHGDQILKSANQIFNPTGTKISAKIAGIHWHYNTRSHAAELTAGYYNTRSHNGYVKIAQMLAKHGAILNFTCMEMKDWQQPGHACCSPEGLVRQVKETAATARVELAGENALERYDWEGYGQVMETSRSDCGNGLVSFTYLRMNKRLFEEQNWREFVRFVRSMEEGGRRERLPDYVSRGSDLYVADIRGIDNKKKKKKHVQEVAMV 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0370 553 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 58 515 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 ProSitePatterns Beta-amylase active site 1. 167 175 IPR018238 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Plant beta-amylase signature 486 500 IPR001371 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Plant beta-amylase signature 404 414 IPR001371 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Plant beta-amylase signature 245 254 IPR001371 GO:0000272|GO:0016161
Mibi10g0370 553 SUPERFAMILY (Trans)glycosidases 85 513 IPR017853 -
Mibi10g0370 553 Pfam Glycosyl hydrolase family 14 89 506 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 141 159 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 401 424 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 366 382 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 383 394 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 330 349 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 120 134 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 255 277 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 438 460 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 163 184 IPR001554 GO:0000272|GO:0016161
Mibi10g0370 553 Gene3D Glycosidases 79 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0370 Mibi-ChrMibi10 5950106 5952481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0370 1 553 Glycoside Hydrolase AT4G17090 66.906 0.0 785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0370 10 5950106 5952481 Mibi10g0370 10 5950106 5952481 ECH