Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0334 ATGGCCATGGCGTCTCCTAAGGATTTACCATCACCAGCCTTCCTCGAAACCATCGACGAGATTACGAGAATTTACAGATCGCTTCCTCTTCGACCTTCCATTGAAGAAGTCGAAGCGGCCAATTCTGCTATCCAAACTATCAACAACGAGGAGAATTTAAAGCTCGAAGAAATTTCAATGCAGAAAGCCCCACACGGTGTCCCTGAGGAGCTTTTCTCTGTTTTACAGGAATTGAAGAAGACCGTTGTGTTGTTCCAGAGCCATGAACAGAGGAAAGAAGCTCTTCACCTTCTTCAACAAGAGAAGATTTTTCAAACTCTTGGTGATCTTATTCAGAGGGCTTCTCGGTTCGTTTCTGGGGATGTCACTGAACCGGAACCTCCCAATTTGGCCGAACCGGAGGGGATAATCGAGACTGGTGTTGATATCGGTGAGAAGGGAAAGGAAGATGGTGAAAAATTGGAGAAAATCAATCTCAACGTTGAAAGAAGATCATCCTCTAAGATATCTCTCTCTGCTGATGATGGAAACTCTGAGAAATTAAGTCTCATGAAAGTGGCCACGGTGATTGAAAACTGTGCTAATAGTGGAGCAGAAATCCTTGAGCTTAGAGGGAAACTTGTGGAGCAGATGGAATGGTTGCCTGTTTCAATTGGGAAACTCTCAAATATCTGTAAGATGGACCTATCTGAGAATAGACTTATGGCTCTACCTTCCACCTTGGGGGATCTCAAGGCCTTAACAAAGCTTGATCTTCATGCCAACCAGCTTATAAACCTTCCACAGTCTTTTGGGGAGTTGATCAACCTCACTGATCTTGACCTTCGCGGCAATCGGTTGAGATCATTGCCGGCTTCTTTTGAAAAATTGGAGAATCTCATTGATCTTGACCTGAGTTCAAATGAGTTTGCACAATTACCAGATTTGATTGGGAGTTTAAGAAGCTTGAGGAGATTAAATGTTGAGATGAACGAACTTGAGGAGCTACCATATACAATTGGAAATTGCTCATCACTTTCAGAGTTGAGATTAGATTTTAATCAGCTCAAAGCCCTTCCTGAAGCGATTGGGAATCTTGAGTTATTAGAGATTTTAACTCTGCACTATAACAGAGTTAAAAGGTTGCCTACTACAATGGGGAACCTGGGCAGATTGAAGGAATTTGATGCTAGCTTTAATGAACTGGAATTTATACCAGAGAACCTATGTTTTGCTGTGACTCTGAAGAAATTAAATGTCTCAAATAACTTTGCAGACCTAAGAGCCCTGCCAAAATCAATTGGGAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGATGATCAGATAAAAGCATTACCAGAGTCCTTCAGGTTCTTGTCCAAACTGAGAGTTTTTCGTGCCGATCAGACTCCTCTTGAAGTACCACCCAGGGAAGTGGTCAAGTTGGGTGCTCAGGAAGTTGTGCAGTACATGGCCGATTTTGTAGCCAAGAGGGATGCGAAATTTCTAGTACCAAAGAAGAAGAAGAGGGGATTTTGGTTCTGGTTTTGTTCGATATTTTGCCCCCAACAGAGATGA 1560 0.425 MAMASPKDLPSPAFLETIDEITRIYRSLPLRPSIEEVEAANSAIQTINNEENLKLEEISMQKAPHGVPEELFSVLQELKKTVVLFQSHEQRKEALHLLQQEKIFQTLGDLIQRASRFVSGDVTEPEPPNLAEPEGIIETGVDIGEKGKEDGEKLEKINLNVERRSSSKISLSADDGNSEKLSLMKVATVIENCANSGAEILELRGKLVEQMEWLPVSIGKLSNICKMDLSENRLMALPSTLGDLKALTKLDLHANQLINLPQSFGELINLTDLDLRGNRLRSLPASFEKLENLIDLDLSSNEFAQLPDLIGSLRSLRRLNVEMNELEELPYTIGNCSSLSELRLDFNQLKALPEAIGNLELLEILTLHYNRVKRLPTTMGNLGRLKEFDASFNELEFIPENLCFAVTLKKLNVSNNFADLRALPKSIGNLEMLEELDISDDQIKALPESFRFLSKLRVFRADQTPLEVPPREVVKLGAQEVVQYMADFVAKRDAKFLVPKKKKRGFWFWFCSIFCPQQR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0334 519 Gene3D Ribonuclease Inhibitor 162 488 IPR032675 -
Mibi10g0334 519 FunFam Plant intracellular Ras-group-related LRR protein 4 180 488 - -
Mibi10g0334 519 Pfam Leucine rich repeat 269 326 IPR001611 GO:0005515
Mibi10g0334 519 SUPERFAMILY L domain-like 200 467 - -
Mibi10g0334 519 ProSiteProfiles Leucine-rich repeat profile. 269 291 IPR001611 GO:0005515
Mibi10g0334 519 SMART LRR_bac_2 313 332 - -
Mibi10g0334 519 SMART LRR_bac_2 382 401 - -
Mibi10g0334 519 SMART LRR_bac_2 405 426 - -
Mibi10g0334 519 SMART LRR_bac_2 221 240 - -
Mibi10g0334 519 SMART LRR_bac_2 267 286 - -
Mibi10g0334 519 SMART LRR_bac_2 290 309 - -
Mibi10g0334 519 SMART LRR_bac_2 359 378 - -
Mibi10g0334 519 SMART LRR_bac_2 430 449 - -
Mibi10g0334 519 SMART LRR_bac_2 244 263 - -
Mibi10g0334 519 SMART LRR_bac_2 336 355 - -
Mibi10g0334 519 ProSiteProfiles Leucine-rich repeat profile. 292 313 IPR001611 GO:0005515
Mibi10g0334 519 PANTHER LEUCINE-RICH REPEAT-CONTAINING 154 330 - -
Mibi10g0334 519 SMART LRR_typ_2 313 336 IPR003591 -
Mibi10g0334 519 SMART LRR_typ_2 221 243 IPR003591 -
Mibi10g0334 519 SMART LRR_typ_2 244 266 IPR003591 -
Mibi10g0334 519 SMART LRR_typ_2 267 289 IPR003591 -
Mibi10g0334 519 SMART LRR_typ_2 359 381 IPR003591 -
Mibi10g0334 519 SMART LRR_typ_2 290 312 IPR003591 -
Mibi10g0334 519 SMART LRR_typ_2 337 358 IPR003591 -
Mibi10g0334 519 SMART LRR_typ_2 382 405 IPR003591 -
Mibi10g0334 519 SMART LRR_typ_2 430 452 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0334 Mibi-ChrMibi10 5378793 5381473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0334 270 480 Receptor kinase-like Gene Family AT3G28890 31.250 8.99e-15 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0334 10 5378793 5381473 Mibi10g0334 10 5378793 5381473 ECH