Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0079 ATGACTTCTTTGAATCTTGGAGCCACTTCTATGCTCACCCAATTGAACAATAACAACAACAACAACAACAACAGATCCAGATCCCCTTCTTTCCATCTCTTCAATGGCCTCAGAAAATCACCCATTTCCTCCTTCCCTTCAAAACCCCCCACTTATAGAACCCCATCTTCCTTCTCCGTCACAGCTGTTCTGACAAAGGAAAACGCCGTCAAGGAGGATGAAAGAGAGAAACCCAGTTTCAATTTCAACGCCTACATGCTAGAAAAGGCCGAAAAGGTCAACAAAGCCTTAGATTCAGCAATCTCCCTCCGTGAACCAGAGAAAATCCACGAGGCCATGAGGTACTCCCTCCTCGCCGGCGGCAAGCGCGTCCGCCCAATGCTCTGCATCGCCGCCTGCGAGCTGGTCGGCGGCGAGGAATCGGCCGCCATGCCATCGGCCTGCGCCGTCGAGATGATCCACACCATGTCCCTCATCCACGACGACCTCCCCTGCATGGACAACGACGACCTCCGCCGTGGAAAACCCACAAACCACAAAGTCTTCGGCGAAGACACCGCCGTCTTAGCCGGCGACGCCCTCTTATCCTTCGCCTTCGAGCACATCGCCGTCGGCACCGTCGGGGTTTCTCCCACACGTGTGGTACGTGCCATCGGTGAGCTGGCGAAGTCGGTGGGGGCAGAGGGGCTTGTTGCTGGACAGGTGGTGGACATAGCTTCCGAGGGAGTGTCCGATGTGGGACTTGAGAAGTTGGAGTATATTCATCTTCATAAGACGGCGGCTTTGTTGGAGGCGGCGGTCGTGTTGGGGGCGATTGTCGGGGGTGGTACGGACGAGGAGGTTGAGAAATTGAGGAAGTTTGCGAGGTATATTGGGTTGTTGTTCCAGGTTGTGGATGATATACTTGATGTGACTAAGTCCTCTGAGGAATTGGGCAAGACTGCTGGCAAGGATTTGGTGGCTGATAAGACCACCTATCCTAAGCTTTTGGGTTTGGAGAAATCGAGGGAGTTTGCTGAGAAGTTGAACATGGATGCGCGAGAACAATTGTCTGGTTTTGATCCTAACAAGGCTGCTCCTTTGGTTGCTTTGGCCAATTACATTGCTTACAGGCAGAATTGA 1122 0.5294 MTSLNLGATSMLTQLNNNNNNNNNRSRSPSFHLFNGLRKSPISSFPSKPPTYRTPSSFSVTAVLTKENAVKEDEREKPSFNFNAYMLEKAEKVNKALDSAISLREPEKIHEAMRYSLLAGGKRVRPMLCIAACELVGGEESAAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVGTVGVSPTRVVRAIGELAKSVGAEGLVAGQVVDIASEGVSDVGLEKLEYIHLHKTAALLEAAVVLGAIVGGGTDEEVEKLRKFARYIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGLEKSREFAEKLNMDAREQLSGFDPNKAAPLVALANYIAYRQN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0079 373 FunFam Geranylgeranyl diphosphate synthase 79 373 - -
Mibi10g0079 373 ProSitePatterns Polyprenyl synthases signature 2. 291 303 IPR033749 -
Mibi10g0079 373 MobiDBLite consensus disorder prediction 1 33 - -
Mibi10g0079 373 CDD Trans_IPPS_HT 105 371 IPR000092 GO:0008299
Mibi10g0079 373 SFLD Isoprenoid Synthase Type I 84 371 - -
Mibi10g0079 373 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 12 373 - -
Mibi10g0079 373 ProSitePatterns Polyprenyl synthases signature 1. 158 174 IPR033749 -
Mibi10g0079 373 SUPERFAMILY Terpenoid synthases 83 354 IPR008949 -
Mibi10g0079 373 Pfam Polyprenyl synthetase 107 339 IPR000092 GO:0008299
Mibi10g0079 373 Gene3D Farnesyl Diphosphate Synthase 74 373 IPR008949 -
Mibi10g0079 373 SFLD Polyprenyl Transferase Like 84 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0079 Mibi-ChrMibi10 1294149 1295270 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0079 10 1294149 1295270 Mibi10g0079 10 1294149 1295270 ECH