Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0077 ATGAGACCCTGCCAGCTGCAAAAGCCTCCAATTCTTTCTTTGCTAATATATCCTTCTCTCTCTCTCTCTCTCCCCCTCCCTCTCTCTCTAAAACCAGATTTGTACTGCTTGATCTTAAATATGATTAAACTATTCAAAGTAAAAGAAAAACAGAGAGAACTTGCAGAGAATGCAAGTGGTGGAGCTCCAATTAAGAAGCAAACTGCTGGGGAGTTGCGTCTGCATAAAGATATAAGTGAGCTGAATCTACCAAAATCTTGTGCTATGCAATTCCCCAATGGTAAAGATGACCTGATGAACTTCGAAGTTTCGATTCGGCCTGATGATGGATATTATTTGGGTGGTACATTTTTGTTTTCCTTCCAAGTGTCTCCCATCTATCCTCATGAAGCACCAAAAGTCAAGTGCAAGACAAAGGTCTACCACCCAAATATTGACTTGGAAGGAAATGTTTGCCTAAACATCTTACGAGAAGATTGGAAACCTGTTCTGAATATAAACACAGTCATTTATGGATTATACCATCTTTTCACGGAGCCAAATTATGAGGACCCTCTCAATCATGACGCGGCAGCGGTTTTGAGAGAGAATCCCAAAATGTTCGAGTCTAATGTAAGGAGGGCTATGGCTGGTGGGTACGTGGGGCAAATCTTTTTCCCTCGCTGTATGTAA 672 0.4152 MRPCQLQKPPILSLLIYPSLSLSLPLPLSLKPDLYCLILNMIKLFKVKEKQRELAENASGGAPIKKQTAGELRLHKDISELNLPKSCAMQFPNGKDDLMNFEVSIRPDDGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKMFESNVRRAMAGGYVGQIFFPRCM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0077 223 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 69 214 IPR000608 -
Mibi10g0077 223 Pfam Ubiquitin-conjugating enzyme 73 208 IPR000608 -
Mibi10g0077 223 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 97 201 - -
Mibi10g0077 223 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 141 156 IPR023313 -
Mibi10g0077 223 SMART ubc_7 72 214 - -
Mibi10g0077 223 CDD UBCc 73 207 IPR000608 -
Mibi10g0077 223 Gene3D Ubiquitin Conjugating Enzyme 65 223 IPR016135 -
Mibi10g0077 223 FunFam NEDD8-conjugating enzyme Ubc12 65 223 - -
Mibi10g0077 223 SUPERFAMILY UBC-like 64 221 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0077 Mibi-ChrMibi10 1231018 1235781 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0077 10 1231018 1235781 Mibi10g0077 10 1231018 1235781 ECH