Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0040 ATGGAGCTAGTAGCTTCTTCACACTTTTCTCCAACTATTCCTACAAACAAGTTTCATTCTCACACCCTATTTCCCGGGCTTATCTCCAGGACTATATGCCTTCAAATCCCACTTGAATTTTCATCCCAATTCATCACCTTTATCAATAGGAATGGTCGTTTTGAAGCATTTGCCCGTAAAAAAGCGAGGGTCAGCGAACTGGAGTATAGCAGAGAGGTCGAAGGAGCAGAGGAACCGCACACAACCTCTTCTTTGGACGACGACTCTTCTTTCTTGTCTCTAAGCGAGAAACCTGACAGGAATTTGGCTTTGTTGGACGATTATGAAGCCGAGGAGCTTGATTATGATATCGACCCTCACCATCGAAGTGGATATGTGGCTCTATTAGGGAAGCCAAATGTCGGGAAGAGTACCTTGGCAAACCAAATGATTGGTCAAAAGTTGTCTATAGTTACACAGAAACCTCAAACAACAAGGCATCGTATTCTTGGTATATGTTCTGGCTCAGATTATCAGATAGTACTTTTCGATACACCTGGTGTTCTCAAGAAGGAAATGCACATGTTGGACTCGATGATGATGAAGAATGTTCGCAGTGCTGCAGTTAATGCTGATTGTGTGTTAATTCTCGTTGATGCCTGTAAAGTTCCTGAAAATATTGATGAGGTGTTGAAGGAAGGTGTAGGAGATCTCGAGGATAAGCCTCCCATTCTACTGATTCTTAATAAGAAGGATCTGATCAAACCTGGGGAAATTGCTAAGAAACTTGAGTGGTATCAGAAAAATACTGATGTTGATGAGGTTATACCAGTTAGTGCTAAATATGGTCATGGCATTGAAGATGTCAAGGACTGGATACTGTCAAAGCTTCCTAATGGACCAGCATACTATCCAAAGGATATTGTCAGTGAGCACCCAGAAAGATTTTTTGTGGGTGAAATCGTTAGAGAAAAGATCTTTATGCAGTATCGAAATGAAATACCCTATGCTTGCCAGGTGAATGTTGTAAGCTACAAGGCTCGGCCTGATGCAAAAGATTTCATACAAGTGGAGATTGTTGTTGAAAAAAATTCACAGAAGATTATACTTATTGGAAAAGAGGGTAAGGCTTTGAAACTTCTTGCAACAGCTGCCCGTCTGGACATTGAAGACTTTCTGCAGAAGAAAGTTTATCTTGAGATTGAAGTGAAGGTGAGAGAAAATTGGCGACAAGACGAGGGGCTTCTTAAGAACTATGGATATGGGGGCCAGATAAGAGTTCTTTAA 1266 0.4123 MELVASSHFSPTIPTNKFHSHTLFPGLISRTICLQIPLEFSSQFITFINRNGRFEAFARKKARVSELEYSREVEGAEEPHTTSSLDDDSSFLSLSEKPDRNLALLDDYEAEELDYDIDPHHRSGYVALLGKPNVGKSTLANQMIGQKLSIVTQKPQTTRHRILGICSGSDYQIVLFDTPGVLKKEMHMLDSMMMKNVRSAAVNADCVLILVDACKVPENIDEVLKEGVGDLEDKPPILLILNKKDLIKPGEIAKKLEWYQKNTDVDEVIPVSAKYGHGIEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVGEIVREKIFMQYRNEIPYACQVNVVSYKARPDAKDFIQVEIVVEKNSQKIILIGKEGKALKLLATAARLDIEDFLQKKVYLEIEVKVRENWRQDEGLLKNYGYGGQIRVL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0040 421 Gene3D - 303 418 IPR015946 -
Mibi10g0040 421 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 122 292 IPR030388 GO:0005525
Mibi10g0040 421 FunFam GTPase Era 119 302 - -
Mibi10g0040 421 CDD Era 121 290 IPR030388 GO:0005525
Mibi10g0040 421 FunFam GTPase Era 303 417 - -
Mibi10g0040 421 Hamap GTPase Era [era]. 121 414 IPR005662 GO:0003723|GO:0005525
Mibi10g0040 421 Pfam KH domain 326 403 IPR004044 GO:0003723
Mibi10g0040 421 Gene3D - 118 301 IPR027417 -
Mibi10g0040 421 MobiDBLite consensus disorder prediction 68 84 - -
Mibi10g0040 421 TIGRFAM era: GTP-binding protein Era 124 397 IPR005662 GO:0003723|GO:0005525
Mibi10g0040 421 Pfam 50S ribosome-binding GTPase 126 243 IPR006073 GO:0005525
Mibi10g0040 421 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 299 414 IPR009019 GO:0003723
Mibi10g0040 421 TIGRFAM small_GTP: small GTP-binding protein domain 126 285 IPR005225 GO:0005525
Mibi10g0040 421 PANTHER GTPASE ERA 69 406 IPR005662 GO:0003723|GO:0005525
Mibi10g0040 421 ProSiteProfiles Type-2 KH domain profile. 323 400 IPR004044 GO:0003723
Mibi10g0040 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 324 IPR027417 -
Mibi10g0040 421 MobiDBLite consensus disorder prediction 68 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0040 Mibi-ChrMibi10 770353 774724 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0040 10 770353 774724 Mibi10g0040 10 770353 774724 ECH